KEGG   Kryptolebias marmoratus (mangrove rivulus): 108248581
Entry
108248581         CDS       T05608                                 
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010  MAPK signaling pathway
kmr04060  Cytokine-cytokine receptor interaction
kmr04150  mTOR signaling pathway
kmr04210  Apoptosis
kmr04217  Necroptosis
kmr04350  TGF-beta signaling pathway
kmr04620  Toll-like receptor signaling pathway
kmr04621  NOD-like receptor signaling pathway
kmr04622  RIG-I-like receptor signaling pathway
kmr04625  C-type lectin receptor signaling pathway
kmr04920  Adipocytokine signaling pathway
kmr05132  Salmonella infection
kmr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108248581 (tnfa)
   04350 TGF-beta signaling pathway
    108248581 (tnfa)
   04150 mTOR signaling pathway
    108248581 (tnfa)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    108248581 (tnfa)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    108248581 (tnfa)
   04217 Necroptosis
    108248581 (tnfa)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    108248581 (tnfa)
   04621 NOD-like receptor signaling pathway
    108248581 (tnfa)
   04622 RIG-I-like receptor signaling pathway
    108248581 (tnfa)
   04625 C-type lectin receptor signaling pathway
    108248581 (tnfa)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    108248581 (tnfa)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108248581 (tnfa)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108248581 (tnfa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:kmr04052]
    108248581 (tnfa)
   00536 Glycosaminoglycan binding proteins [BR:kmr00536]
    108248581 (tnfa)
Cytokines and neuropeptides [BR:kmr04052]
 Cytokines
  Tumor necrosis fators
   108248581 (tnfa)
Glycosaminoglycan binding proteins [BR:kmr00536]
 Heparan sulfate / Heparin
  Cytokines
   108248581 (tnfa)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 108248581
NCBI-ProteinID: XP_017292930
LinkDB
Position
LG5:complement(20155824..20158171)
AA seq 245 aa
MTGECMIAMNATPDTEAAKQTPQSATGFHSSRLTMALMAFTLCLAVAASAALLVFSLNAK
DSRPAEDNFDLRHTLRQISNVRAAIHLEGQYNADMNTSVKWTSNIDQSHSQGGLELDNNE
IVIPRDGLYFVYSQASFRVRCSSNADDSSSNSMIHLSHTVKRWTSLFGSDKDDESYQTIL
HSVRTACQKTAGSDSGSKESWFSVVYMGAVFNLKSGDRLKTEMEEQMLKKVEDEPGKTYF
GVFAL
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaccggtgaatgcatgatagcgatgaatgctacacctgacacagaagctgctaagcag
accccacagagtgccacagggtttcatagctcaaggctaaccatggccctgatggctttc
actctttgccttgctgttgctgcttctgctgctctcctcgtcttcagcttaaatgccaag
gactcaagaccagctgaagataactttgatctccgtcacacgctgaggcaaatttcaaac
gtgagagcggccattcatttagaaggacaatacaacgccgacatgaacacatcagtgaaa
tggacgagtaacatcgaccagtcccattctcagggaggtctagaactcgacaataacgag
attgtgattccacgagacggcctctactttgtttatagccaagcatctttccgggtcaga
tgcagcagcaatgctgatgactcttcatcgaattccatgatccacctgagtcacaccgtg
aaacgctggacgagcttgttcgggagcgacaaagatgacgagtcctatcagaccatcctg
cactctgttcggactgcctgccagaagacagccggcagcgattcgggctctaaagaaagc
tggttttctgtcgtgtacatgggagccgtgttcaacctgaagagtggggaccgactgaag
acggagatggaggagcagatgctgaagaaagtagaggacgagccaggaaagacttacttt
ggcgtgtttgctttgtga

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