Kryptolebias marmoratus (mangrove rivulus): 108249893
Help
Entry
108249893 CDS
T05608
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04140
Autophagy - animal
kmr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108249893 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108249893 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108249893 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
108249893 (plekhm1)
Membrane trafficking [BR:
kmr04131
]
SNARE
SNARE associated proteins
Others
108249893 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
108249893 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
zf-UDP
Motif
Other DBs
NCBI-GeneID:
108249893
NCBI-ProteinID:
XP_017295031
UniProt:
A0A3Q3AC53
LinkDB
All DBs
Position
LG17:23549819..23562402
Genome browser
AA seq
1061 aa
AA seq
DB search
MMLATQMPETPQAAKDVKQIKEKLSQSLKALQKRYVTSEVVVTSEDGDANLLCSALEAIF
IHGLKSKYIRSEAGGRGRKTDRGPLPQPFFWSLLKTVTHRDVITELEKINFLGTDVGRCR
AWLRLALNHGLLECYLASLFREDSKLRAHYQPGALLLNEEEREVLLSYLQGLASLTFNLS
YKSAVLNEWTTTPLALAGLCPLALLGALDLPINGGDHSTLKPEHKESWDTASQSSGSSDA
PEAQRCCPVLLLKEAGVLQREPGLHSSNVSLDTTESSQLSSSLSSDSLLQGQDPRSPAGD
PWSPGDLDAPINISISTKRPRKDVHTDFQENGGCSQDSMREDSFVSSTGADPFSEIATFS
GSDGETQSHAVPPQDPLEQLPSSDPEPPPSSVEPPAPEESRQTEPTVVPSVVEPVEAGVE
EDPEPVQEIKETEKNDSECQTRKASQCSASIVSRKLSSDSLSHSRSWISDDDIYKPHLEQ
VPDGEETSPSAPAAELGACQSPPSVVHRRQIGLSNPFRGLLRLGHLERRGPVGIWRDYYC
ELSPFEFRLYLNAEERTCCDNCSLLRCDDVRLASPEGRFELSFSGKRLYLRAANRDEAED
WADRVIEAVNKCRPATRPDEQWEVLRPSGNGVDERTLSPPSSASSSPERRLSSSETSGGQ
DGTPPPQEFDWTRTTDLETDAIKEAVLYSSTDPEARTWTPLVFSLSLEALRGFRVEEGKK
FLRLTHPIEEIRDVVPDVSQGGADFFKVLTVKETLRFRAESAEEARSWRALIRGALDSYL
ESGEDELSEESAPVSSAGATGNLHRLVQHRLKEDGVLLVHLSTVPSERGLDTQNFKCAGC
PKQIGPSLGRARLCEFSGQYYCDSCHKGDTTILPSRMVHNWDLTQREVSRKALHLLAQVE
HEPLLNLEQLNPDLVKHSESIAQAHSLREKLRLLGDYLLTCRSGACRKLQARMEQRTYLL
ESSHLYSVRDLRQIADGEFAAFLVRLVHHASSHVFSCDLCTQRGFICQICHSDDILFPFQ
FESTVRCNDCKAVFHRSCKSSSPSCPRCQRMKKYLQRDQQD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttgccacacagatgccagaaacgccacaggcggcgaaggacgtcaaacagatc
aaggagaagttgtctcagtctctgaaggccctgcagaaacgctacgtgacgtcggaagtc
gtggtcaccagtgaagatggagacgctaacctcctctgctccgccctggaggccatcttc
atccacgggctcaagagcaagtacatccgctctgaagcgggaggccgaggcaggaagacg
gaccgcggacccctccctcagccttttttctggagcctcctcaagaccgttactcaccgc
gacgtgatcacggagctggagaagatcaacttcctcggcacggacgtggggcgctgcaga
gcgtggctgcgcctggccctcaaccacggcctcctggagtgctacctggcgtctctgttt
cgcgaggactccaagctgcgcgcccattatcagcccggcgccttgctcctgaacgaagag
gagcgggaagtcctgctcagctacctccagggcctggcttcgctcacctttaacctgtcc
tacaagtcggctgttctcaacgaatggaccaccacgcctctggctcttgctgggctgtgc
cccctggccctgctgggcgccctcgacctcccgatcaacggtggagaccattccaccttg
aagccagagcacaaggaatcatgggacacggcgtctcagtcgtcgggctcgtcggatgct
cccgaagcgcagaggtgctgcccggtgttgctgttgaaggaggcgggtgttttgcaaaga
gaacctgggctccactcctcgaacgtgagcctggacaccacagagtcctctcagctctca
tccagcttgagctccgatagcctcctgcagggtcaggacccccgcagcccagcaggggac
ccatggtctccgggggacctggatgctcccattaatatcagcatcagcaccaagaggcca
cggaaagacgtgcacacggacttccaggagaacggtgggtgcagtcaggactccatgcga
gaagactcgtttgtctccagcaccggagccgatccgttctcagagatcgccactttcagc
ggctcagacggcgagacccaaagtcacgctgtcccaccccaagacccgctggaacagctc
ccaagttctgacccggagcccccgccgtcctccgtcgagccgccggcacccgaggaaagc
cgccaaacggaaccaaccgtggtcccctcggttgtcgaacccgtggaggctggcgttgag
gaagatccagaaccggttcaggaaatcaaagaaacggagaagaacgactctgaatgtcaa
acacgtaaagcatcacagtgctctgcgagcatcgtcagcagaaaactgtcctcagattcg
ctttcacattcccgctcttggatttctgacgacgacatctacaagcctcacctggagcag
gtgccagacggcgaagaaacgagtccgtccgcgcccgcagccgagctcggcgcctgccag
tcccctcccagtgtcgtgcatcgcagacaaatagggttgtccaatcccttccgaggcctg
ctgaggctcggccacctggagcgccgcggcccggtggggatttggcgcgactactactgc
gagctctccccgttcgagttccgcctctacctgaacgccgaggagcggacgtgctgcgac
aactgctcgctgctgcggtgcgacgacgtccggctggcctcgccggagggccgcttcgag
ctgagcttctccgggaagcggctctacctccgagcggccaaccgcgacgaggcggaggac
tgggcggaccgcgtcatcgaggccgtgaacaaatgccgcccggcgacgcgccccgacgag
cagtgggaggtgctgcggccatccggtaacggtgtggacgagcgcacgctgtcccctccg
tcctctgcctcctccagccccgagagacgcctatcgtcctcggagacgagcggagggcag
gacgggactcctcctccgcaggagtttgactggactcggactacagacctggaaacagat
gctatcaaagaagcagttttatattcctccacagatcccgaggccagaacctggacgcct
ctggtcttttctctctccttggaggctctgaggggcttccgagtggaggagggaaagaag
ttcctgaggctaactcatcccatcgaggagatccgggacgtggttcccgacgtctcccag
ggaggagcggacttcttcaaagtcctgaccgtcaaggagacgctgcgattccgggcggag
agcgccgaggaggctcgctcctggagggctctgatccgcggcgctttggactcgtacctg
gagagcggagaggacgaactctccgaggaatccgccccggtttccagcgctggagcgacc
gggaatctgcacagactggtgcagcacagactgaaggaggacggggttctcctggttcat
ctttccacggttccatcagagaggggcttggacacgcagaacttcaaatgtgcaggctgt
cccaagcagatcgggccgtccctgggcagagccaggctctgtgagttttcaggccagtac
tactgcgacagctgccacaagggggacaccaccatactcccgtcccgcatggtgcacaac
tgggacctcacgcagcgagaggtgtcgaggaaagctctgcacctgttggctcaggtggag
cacgagccgctgctgaacctggagcagctgaaccccgacttggtgaagcactccgagtcc
atcgctcaggcccacagcctgagagagaagctgcgcctgctgggggactacctgctcacc
tgccgcagcggcgcctgcaggaaactccaggccaggatggagcagcggacgtacctgctg
gagtcgagccacctgtacagcgtcagagacctcagacagatagcagacggagagttcgca
gccttcctggtcaggctggtgcaccacgcctcgagccacgtgttcagctgtgacctttgc
actcagaggggcttcatctgccagatctgccactcggacgacatcctcttccccttccag
tttgaaagcacagtcaggtgtaacgactgtaaagccgtgttccaccggtcctgtaagtcc
agcagcccgtcttgtcctcgctgtcagagaatgaagaaatacctgcagagggatcagcaa
gactga
DBGET
integrated database retrieval system
