Kryptolebias marmoratus (mangrove rivulus): 108250027
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Entry
108250027 CDS
T05608
Symbol
trpm4a
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4a isoform X2
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108250027 (trpm4a)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108250027 (trpm4a)
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
RNA_binding
Motif
Other DBs
NCBI-GeneID:
108250027
NCBI-ProteinID:
XP_017295191
UniProt:
A0A3Q3APB8
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Position
LG12:complement(21686989..21767407)
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AA seq
1262 aa
AA seq
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MVVDLQKDKDGGGGKSGSRKEKDQSWIPKVIKKQVCTTFVESSSNGALCQCGGEQEVHDS
VATGDCFGAAIVTQWESSQHTSEHPTDAFGELEFAGQGRRHSHFLRFSCDTPPHIIYTLM
TTHWGLPSPNLVVSVVGGEGHEKIKPWVRDILRKGLVRAAQSTGAWILTGGLREGISRCV
GEAVRDHGAAATALSQKKVIAVGVAPWGLVHNRQQLVNAQGSFPARYYVQNSSRDSYSLD
NSCQAFLLVDNGSVGQRGGETAFRSNLEHHISNQRTGIWGSGSIEIPVLCMLISGDVSML
ERLDASLKKATPWLVLAGSGPAADFISDLLGNLSDVGLSPTSPAADGEGADGFSTEFCDK
VREKVQRYFPTETKLEKMVDSALSIYQNRKLITVFDGEQEGSDDFDTVLLKGLVRASKRE
SSKASEYFDELNLAVAWNRVDIAKAELFNGDIQWTYDDLEESMTDALINDKPKFVRLFCE
NGLNILDYLTYGRLESLYCSLSDSSLVYNLLQRHLRERQDVAVSQSSVDGATVPVKNSQC
ELKTPASMKDLSLYEVSQLLSDLIGDICQPFYYGPFGFDHSISTRRALKQVNKLLQGDCK
YRDQFCLTPWAALFIWAVLQNRKEMAIYFWEMAGESVLSALGGCKILRELSKLESETESK
LAMKQLAQKFENLANDVFGTCYQSSESRSFTLLIKKSPVWGGATCLQMATAADARLFFSH
DGVQSLLSQIWWGDMDRNTDAWKLVLSFFLPPLIYTYLIKFREPEEVVNPLAIHNSKSKD
NDSVEGNDATVLSLSDIMQNEEDAEELRSLKENGVEPVSLPKASQRPFIVSRWRQFWYSP
VTSFLGNVLMYFLFLCLFAYVLLVDFKPPPPDGPSSLEFLLYFWVFTLVCEEIRQSQTFF
AGSLFVVQGLKNYIQDVWNKCDLTAIVLFLLALCCRMFPWSYQFGRAVMAIDYMVFTLRL
IHIFAIHKQLGPKIIIVGKMMKDVFFFLFFLGVWLMAYGVANQALLFSYDSRPNWIFRRV
LYRPFLHIFGQIPIDEMDSDKLKEMHCTNNATEIDAGAEPCLNIYANWLVVLFLVIYLLF
TNIVLVNLLIAMFSYTFSKVQGHSDTYWKFQRYNLIVEYHSRPCLAPPFIIFSHLHIFIK
RHIRRIPSVKSRHFVLELRGRKASQIEAWEAIQKENLLSAQNKRQRESDTARLQRTSVKV
DSVLKQMTEIRDHERRLLLLETQLEFCCSALSWMTEALSQSDVVKARRPAPLLKDPTPLS
PS
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggatctgcagaaagacaaggacgggggaggagggaaatctgggagcaggaaa
gaaaaggatcagagctggattccaaaggttatcaagaaacaagtgtgcacaacttttgtt
gaaagctccagtaatggagccctctgtcagtgtggtggtgaacaggaagtccatgactct
gtggcaacaggggactgctttggagcggccattgtcacacagtgggaaagcagtcagcac
acatcagaacatcctactgatgcttttggagaactggagtttgctggacaaggacgcaga
catagccattttctgcgtttttcgtgtgacacaccaccacatatcatctacaccctaatg
acgactcactggggtctgccatcacctaacctggtggtgtcagtggtaggcggtgaaggt
catgagaagattaagccatgggtgagagatatcctgagaaaagggctggttagggcggca
cagagcacaggggcctggattttgacgggggggctcagagagggcatttcccgctgtgtg
ggtgaggctgtgagagaccatggtgctgcagctacagctctgtctcagaaaaaagtaata
gctgttggagtggccccctggggtctggtccacaacaggcagcagctggtcaacgcccag
gggagttttcctgctcgttactatgtccagaactcgtcacgtgactcgtactccttggac
aacagctgtcaagctttcctcctggtggacaatggaagtgttggtcaacgaggaggagag
acagcttttcgttctaatctggagcaccacatttccaatcaacgcacaggcatttggggt
agtggaagtattgaaatcccagtgctttgcatgctgatctcaggagacgtcagcatgctg
gagaggttagatgcttccctgaagaaagcgacaccatggctggttcttgctggttctggt
ccagctgctgattttatcagtgacctgctgggtaatctgtcagatgtggggctcagtccc
acctctccagcagcagacggggagggtgctgatggtttcagcacagaattctgtgacaag
gtccgagagaaggtccaaagatacttcccaactgagactaagctggagaaaatggtggac
agtgctttgagtatttatcagaacaggaaactgattactgttttcgacggggaacaggag
ggttctgatgactttgacacggttctccttaaaggcctcgttagagctagtaaacgtgag
tccagtaaagccagtgagtactttgatgagctgaacctggctgtggcctggaaccgagtg
gacattgctaaagctgaactcttcaatggagacatacagtggacatatgatgaccttgag
gaatccatgacagatgctctgatcaatgacaagcccaagtttgtgcgtcttttctgcgag
aatggtctcaatattcttgattatctgacatatgggcgcttggagagcttgtactgctca
ctgtcagacagctcgctggtttacaaccttctccagagacatctgagagaaagacaggat
gtggctgtgtcccagtcctctgtggatggagccacagtacctgtgaagaattctcagtgt
gaactaaaaacacctgcttcaatgaaagatctcagcctgtatgaggtatctcagctgctg
tcagatcttataggtgatatctgtcagcctttctattatggaccttttggctttgaccac
agcatcagcactaggagggctctaaagcaagtgaataagttgctgcagggtgactgcaag
taccgggaccagttctgcctcacaccctgggcagccctcttcatctgggctgtcttacag
aaccgcaaagaaatggctatttacttctgggagatggcaggggagtctgtactcagtgct
cttggtggctgtaagatattgagagagctttcaaagctcgaaagtgagactgagagcaag
ctggcaatgaaacaactggcacagaagtttgaaaatctggcaaacgatgtgtttggtacg
tgttaccagagcagtgagagtcgctccttcaccctcctcataaagaagtctcctgtgtgg
ggcggagctacatgtttgcagatggccacagcagctgatgcccgcctcttcttcagccat
gatggtgttcagtctctgctgtctcagatctggtggggtgacatggacaggaatacagat
gcctggaagctggttctctcctttttcctcccccctctcatctacacataccttatcaaa
ttcagggaaccggaagaggtggttaatcctttagcaatccacaacagcaaaagcaaagac
aatgacagtgtcgagggaaatgatgctactgtcttgtcactctctgacatcatgcaaaat
gaggaagatgcagaagaattaagatctcttaaggaaaatggagtggaaccagtctcattg
ccaaaagcttctcagagaccatttattgtgtcaagatggaggcagttctggtattcgcct
gtcacttcattcctgggaaatgtgctgatgtacttcctcttcctttgcctgtttgcctat
gttctgctggtggacttcaagcccccaccccctgatggcccctcctcactggagtttttg
ctttacttttgggttttcaccttagtatgtgaagagattcgtcagtcacagaccttcttt
gcgggcagtttatttgttgtacaaggactgaaaaactacatccaagatgtttggaacaag
tgtgatctcacagcaattgttcttttccttttggctctgtgctgcagaatgtttccctgg
tcttatcaatttgggcgagctgttatggccattgattatatggtcttcacgctgcgtctg
atccacatctttgccatccacaaacagcttggacccaaaatcatcattgttggaaaaatg
atgaaagatgtctttttcttccttttcttccttggggtttggctcatggcctatggagtt
gccaatcaggcacttcttttctcatacgattcccgacctaattggatattccgccgagtc
ctctacagaccatttctgcacatttttggacaaatacctattgatgaaatggattccgat
aaattaaaagaaatgcactgcacaaacaatgctacagaaattgatgcaggagcagaaccc
tgtttgaacatctatgccaactggctggtcgtccttttcctggtcatctacctgctgttt
accaacatagtactggtcaacctactcattgccatgttcagctacaccttctccaaagta
caggggcacagtgacacctactggaagtttcagcgctacaacctgattgtggagtaccac
tccaggccctgtctggcaccacccttcatcattttctcccacctccacattttcatcaag
agacacatccgccgtattccttctgtcaagagtcggcactttgttctggagctgcgaggc
aggaaggctagccagattgaggcatgggaggctatccagaaagaaaacctcctttcagct
cagaataaacggcagagggaaagtgacacggcccgacttcaacgtacatctgttaaggtg
gacagtgttctgaagcagatgacagaaatcagagaccatgagcgaaggttgctgctgcta
gagacacagctggagttctgctgcagcgccctctcctggatgactgaagctctgtctcag
agtgatgtggttaaagccaggaggcccgctccactcctcaaagatcctactccactgtct
ccaagctga
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