Kryptolebias marmoratus (mangrove rivulus): 108250465
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Entry
108250465 CDS
T05608
Symbol
si:busm1-48c11.3
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain isoform X2
KO
K06752
MHC class II antigen
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04145
Phagosome
kmr04514
Cell adhesion molecules
kmr04672
Intestinal immune network for IgA production
kmr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108250465 (si:busm1-48c11.3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108250465 (si:busm1-48c11.3)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
108250465 (si:busm1-48c11.3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108250465 (si:busm1-48c11.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108250465 (si:busm1-48c11.3)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108250465 (si:busm1-48c11.3)
Exosomal proteins of epithelial cells
108250465 (si:busm1-48c11.3)
Exosomal proteins of breast milk
108250465 (si:busm1-48c11.3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
ig
I-set
Ig_2
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
108250465
NCBI-ProteinID:
XP_017295836
UniProt:
A0A3Q2ZZ45
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Position
LG7:125469..131095
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AA seq
239 aa
AA seq
DB search
MMKMKLLLFLCGVLCVSADVLHEDLYIAGCSDSDGEDMYALDGEEMWFADFKKGVGVEPQ
PPFIDHISFVEGAYEGAVADQQVCRSNLGVSRKAMKDLPLERDPPSRVMIYPRDDVEPGE
KNTLICHVSGFYPAPVEVYWTKNGQNVTEGSRINVPLLNKDDSFTQISRLDFIPELGDIY
SCTVKHLALKEPQTRIWNVQDEAAQPGIGPSVFCGVGLTVGLLGVAVGTFFLIKGNECR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagatgaagctgctcctcttcctctgcggtgtcctctgtgtctctgctgacgtt
cttcatgaggacctttatatcgctggctgttcagactctgatggagaggacatgtatgct
ctggatggagaagagatgtggttcgcagactttaagaaaggagtcggagtcgaacctcag
cctccttttatagatcatatcagcttcgtggaaggagcttatgaaggtgctgtggctgat
caacaggtctgcagatcaaacctgggcgtcagtcgtaaggctatgaaggaccttcctttg
gaacgagatcctccgtctcgtgtgatgatctaccccagagacgatgtggagcctggagag
aagaacactctgatctgtcatgtttctgggttctacccggctcctgtggaggtctactgg
accaagaacggacagaacgtgactgaaggatccagaatcaatgttcctcttctcaacaaa
gatgattctttcactcagatctccagactggacttcatccctgagctgggagacatctac
agctgcacggtgaaacatctggccctgaaagaaccacagaccaggatctggaatgtgcag
gacgaggcggctcagcccggtatcggaccttcagtgttctgtggggtcggtctgaccgtc
gggctcctcggtgtggctgtcggaaccttcttcctcatcaaaggaaacgagtgcagatga
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