Kryptolebias marmoratus (mangrove rivulus): 108250552
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Entry
108250552 CDS
T05608
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108250552 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108250552 (irf5)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
108250552 (irf5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
108250552
NCBI-ProteinID:
XP_017295979
UniProt:
A0A3Q3ADC5
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Position
LG18:complement(20949528..20957319)
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AA seq
506 aa
AA seq
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MSIQPRRIRLKPWLLAQVNTGRYPGLQWLSSDHRLFQIPWKHATRHTPVSDEENTIFKAW
AVETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVKPYKIYEVCELPGNT
DGAEDDEEEMPNLMDLTITAPRISEPSTFTFGLSSNGTFAPPHVIPVPLLPMTPDLPMTS
NLQAQGQMVDQGGFGPPRGLPNRLQDLNSLPSTAGSVQPVPESMEASNTGVIQNQADPQN
HQPCKYDLLSSVPLTDLDLKFLYRGRTTGSLTVSNPQGCRLYYGHLEPTPEQVDLFGPVT
LQQVLFPGTSEIQNQKQRFYTEALLDVMDRGLILEIQEQDIYAIRLCQCKVFWSGPGMPE
QGPPNPMERERKIKVFSLNDFLQGLILFQKGETPNPPPFEVFFCFGEDWPDKKPKEKKLI
IVQLVPVVARILTEMFSGELNWSTDSIRLQISTPDVKDQTVEQFKELQRLLQSQLGLQGP
WGPSVPPGALNAPMNNTSSGFSLGNS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccaaccccgcaggatccgtctaaagccctggctgctggctcaggtgaacacc
ggcaggtatcctggtctccagtggctcagctcggaccaccgcctcttccagatcccctgg
aaacacgcgacccgccacactccggtgtcagacgaggagaacaccatctttaaggcgtgg
gcagtagagacggggaagtatcaggagggtgtggatgagcccgaccctgccaagtggaaa
gccaacctgcgctgcgctctgaacaaaagccgggagtttcagctgaaatacgatggaacc
aaagagacgccggtgaaaccatacaaaatctacgaagtgtgcgagctgcctgggaacaca
gatggagctgaggatgatgaagaggagatgccaaatctcatggacctcactatcacagcc
ccccggatcagtgagccatcaaccttcaccttcggtttatcctccaatggaacatttgca
cctccacatgtgatcccagtgcctctcctccctatgacccctgacctcccaatgacctct
aatttgcaggctcagggtcaaatggtggatcaggggggctttggtccgcctagaggactc
cctaatagacttcaagacctgaattcgcttccctccacagctggctctgttcagccagtg
cctgaatcaatggaggccagcaacacgggggtcatccagaaccaggcagaccctcagaac
caccaaccctgcaagtatgatctgctgagcagtgtaccattaacagacctggacctgaag
ttcctgtacaggggccgcacaacaggctctcttacagtcagtaacccccagggctgccgt
ctttactacggacacctggaaccaaccccggagcaggtggacctgtttgggcctgtgact
ctacagcaggtcctgttcccaggcacatctgagatccagaaccaaaagcagaggttctac
acggaggccctactagatgtgatggatcgaggccttatcctggagatccaagaacaggac
atctatgccatccgcctctgtcagtgcaaagtgttctggtctggaccgggcatgccagaa
cagggaccaccaaaccccatggagagagaaaggaagatcaaagttttcagcctcaatgac
ttcctgcaaggcctcatcttgtttcagaagggtgaaactccaaaccctccaccctttgag
gtgttcttctgttttggagaagactggcctgacaagaaaccaaaagagaagaaactcatc
atcgtccagctggttccagtggtggctcggatcttgacggagatgttttcaggagaactg
aactggtccacagacagcatccggctgcagatctcaacacctgatgtgaaagaccagaca
gtggagcagttcaaagagctgcaaaggctcctgcagagccaactcgggctccagggaccc
tggggtcccagtgttccccccggggccctgaatgctcccatgaacaatacatccagtgga
ttttcacttgggaacagctga
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