Kryptolebias marmoratus (mangrove rivulus): 112450954
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Entry
112450954 CDS
T05608
Name
(RefSeq) protocadherin gamma-C5
KO
K16497
protocadherin gamma subfamily C
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
112450954
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Protocadherins
112450954
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
BppU_N
Motif
Other DBs
NCBI-GeneID:
112450954
NCBI-ProteinID:
XP_024864375
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Position
LG9:17480465..17483715
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AA seq
821 aa
AA seq
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MTKRNRCGDRRWLGIWCYHFFLLWSTINGQTRYSIPEELKQGSVVGNLAKDLGLGLSDIV
DRNLRVASEAGEQYFSVDAGKGELLVNDRIDREALCGQSASCVLPLQVVVENPLQLHRIE
VEIRDVNDNAPTFLKSDHVIEIAESTVVGVRFPLEMAEDPDVGSNGLKTYTLSKDDCFSL
KVKEIENGRKVPELVLNKSLDREKKAKHILFLTALDGGNPVKTGTSKITINVLDINDNVP
QFESSFYKIAVKENSANGSFVITTKATDIDEGPNGEIEYSLGVHTPPSVLSLFHIDAVTG
DVYLKKQLDHETQTSYRIDISAKDKGLPKMEGHCTLQVDVLDVNDNAPEIVLTSKSASVP
EDSRSGTVVALISVRDLDSGENGKVSLQLPKGFPFILKPSFSNNYALITNGPLNRENVSE
YIVEITATDSGSPPQSTQKYIPVTITDVNDNPPVFTQPSYNVYLKENGVPGSILFSVSAS
DLDSGENAKISYSILDSKVQDVSVSSYVYMNADNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPCLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWISYRLAEATDTSLFTVNQYTGEVRTKRAVSEQDESSQRLLIEIKDDGEPLQSAT
ITVSILLEDGLHEPILELRHKTSEPNRKTGRITLYLILSLASVSVLSLVTFLILAVKCIR
NSRSSGSCCMRRSDCDDYKKPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSS
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaaatagatgcggagaccggagatggctcgggatttggtgttatcatttc
tttctcctgtggagtacaataaacggacagactcgttacagtatcccggaggaactaaag
cagggttcggtggttggaaatctcgccaaagatctgggtttaggactatcagatattgtt
gatcgtaacctgcgcgtcgcctctgaggctggtgagcagtatttcagtgtggatgcgggg
aagggcgagctgctggtgaatgacaggatagacagagaggctttatgtggacaaagcgcc
agctgcgttctacctctgcaagtcgtagtggagaacccgctgcagttacacagaatagaa
gttgaaataagagacgtgaacgacaacgctcccacgttcctcaaaagtgatcatgttata
gaaattgctgaatccaccgttgtaggtgttcgctttcctttagagatggcagaggatcct
gatgttggtagtaacgggttaaagacttacacactgagcaaagatgactgcttctctttg
aaagttaaagaaattgaaaatggaagaaaagtacctgagcttgtattaaataaatcatta
gatcgggagaaaaaagcaaaacacattttatttcttacagcattggatggaggtaatcct
gtgaagactgggacttcaaaaataacaattaatgtgcttgacattaacgacaatgttcca
cagtttgaaagcagtttttataaaatcgctgttaaggaaaacagtgcaaacggttctttt
gtcattacaaccaaagcaacagacattgatgaaggtccaaacggagagatagaatattct
cttggtgtacacacaccaccatccgttttgtccttatttcatatagatgctgtaacggga
gatgtgtatttaaaaaagcaattagaccacgaaacgcaaacttcctatcgaatagacata
agtgcaaaagataaaggcttgcctaaaatggagggtcactgcactctgcaggtggatgtt
ttagacgtaaatgataacgccccagaaattgttctcacgtctaaatccgcttctgtccct
gaagactctcgcagtggaacagtggtggctctgatcagcgtgcgtgatctcgattcaggt
gaaaacggaaaggtcagcctgcagcttcccaaaggttttccctttattctaaaaccatct
ttttctaataactatgcgctgattacaaacggtccgttaaacagagaaaatgtctcagag
tatattgttgagataacagcaactgattcaggttcccctcctcagtcaactcaaaaatat
ataccagtgaccataactgatgtgaatgataatccccctgtatttactcagccttcctat
aatgtttatctaaaagagaacggagtaccaggttctattctgttctcagtttcagcatct
gatctggattctggtgaaaacgcaaagatctcttactccattctggactctaaagtgcag
gacgtttctgtctcatcttatgtttacatgaacgcagataacggcagcatctacagcatg
cattcgtttgactatgagaagctgaaggtgtttcagatccaggttcaggcaaaggaccag
ggctctccgtgtctcagcagcaacgccactgtccatgtttttatcctggaccagaacgac
aacgcccccgctgttatttacccctcctccgctgccctgggctccctctctcatcagagg
atgccccgctccgctaaagcgggtcacctggttaccaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcctacagactggcggaggccacagacacctctctgttc
actgtcaatcagtacacaggagaggtgaggactaaacgcgctgtgtccgagcaggacgag
tcctctcagaggctgctgatagagatcaaggacgacggagaaccgcttcagtccgccacc
atcacggtgtccatcctgctggaggacgggctccacgagcccatcttagagctgcgacac
aaaacgtccgagcccaacaggaaaaccggcagaatcaccctgtatctgatcctgtctctg
gcctcggtgtccgtgctgtctctggtgacttttctcatcttagcggttaaatgcatcagg
aacagcagaagcagcgggagctgctgcatgaggcggagcgactgtgatgattacaagaag
cccaacaggaacctgcagattcagctcaacactgatggacccataaagtacgtggaggtc
ctgggaggagacatgatgtctcagagtcagtccttcaggtcctgcatgtctccgatgtca
gagtacagtgatttcactctcattaaacccagcagcactacagactttaaagaagtcatc
agtgttctggatgcgtctttacccgacagcacgtggacctttgagagccagcaggtgagc
agttga
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