Kluyveromyces marxianus: KLMA_20309
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Entry
KLMA_20309 CDS
T05269
Symbol
CAF16
Name
(RefSeq) CCR4-associated factor 16
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLMA_20309 (CAF16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_20309 (CAF16)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
KLMA_20309 (CAF16)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_23
AAA_29
RsgA_GTPase
Dynamin_N
AAA_24
MMR_HSR1
nSTAND3
DUF6079
AAA_15
AAA_7
PduV-EutP
AAA_22
AAA_16
AAA_18
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
34714784
NCBI-ProteinID:
XP_022674639
UniProt:
W0T567
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Position
2:complement(663708..664553)
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AA seq
281 aa
AA seq
DB search
MSDKNIKDNNNLAVEVKNLTYTFPEGKAASIIDLSLSIKWNKKVLVVGNNGAGKSTLLKL
LSGKHLCLGGDIRVGGRNPFAPNNDQESVTLTTYLGTEWASMSIIHRDIGVLELLESIGL
EHYRERGERLIQILEVDTNWRMFKLSDGQKRRVQLCMGLMKPFKVLLLDEVTVDLDVVAR
DRLFQFLDDETKQRECTVVYATHIFDGLAQWADEVIHLQDGRIAKMLDYGRDIEFTKDIE
GVQEQSASDNKPYKVVLGYMKSLYPLALHWLSRDQDAHHAA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaagaatataaaggataacaacaacttggctgtagaagtgaaaaacctaacg
tatacattcccagagggtaaagcagcttcgatcatagacctgtcacttagtatcaagtgg
aataaaaaagttctagtggtaggtaataatggtgctggtaagtccacattactaaagctc
ttgagcgggaaacacttgtgtcttggaggagacattagggtcggaggaagaaacccattc
gcaccgaacaacgaccaggagtctgtcactttaactacatatttgggtaccgaatgggcg
agcatgtcaattattcaccgggacattggcgtgcttgagttgctagagagcataggtctt
gagcattacagagagcgtggggaaaggttgatccagatcttggaagtggacaccaactgg
cgaatgttcaagctcagcgacggacaaaagagacgtgtgcaattgtgcatggggcttatg
aaaccgttcaaagtcctactgttggacgaagtgactgtcgatttggatgtcgttgcacgt
gaccgccttttccaattcctagacgacgagacaaaacaaagagagtgcaccgtggtgtat
gcaacccatattttcgacggattggcccagtgggccgacgaagtgatccacctccaggat
ggtcgcatagccaaaatgttggactatggacgtgatatcgagtttacgaaagacatagaa
ggcgtgcaggagcaaagtgcctcggataataagccatacaaagtcgttctaggatacatg
aaaagtttgtacccattggcgttgcactggctctcgcgagaccaggacgcacatcacgct
gcgtga
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