KEGG   Kluyveromyces marxianus: KLMA_20309
Entry
KLMA_20309        CDS       T05269                                 
Symbol
CAF16
Name
(RefSeq) CCR4-associated factor 16
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
kmx  Kluyveromyces marxianus
Pathway
kmx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kmx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KLMA_20309 (CAF16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kmx03019]
    KLMA_20309 (CAF16)
Messenger RNA biogenesis [BR:kmx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     KLMA_20309 (CAF16)
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_23 AAA_29 RsgA_GTPase Dynamin_N AAA_24 MMR_HSR1 nSTAND3 DUF6079 AAA_15 AAA_7 PduV-EutP AAA_22 AAA_16 AAA_18 ORC-CDC6-like
Other DBs
NCBI-GeneID: 34714784
NCBI-ProteinID: XP_022674639
UniProt: W0T567
LinkDB
Position
2:complement(663708..664553)
AA seq 281 aa
MSDKNIKDNNNLAVEVKNLTYTFPEGKAASIIDLSLSIKWNKKVLVVGNNGAGKSTLLKL
LSGKHLCLGGDIRVGGRNPFAPNNDQESVTLTTYLGTEWASMSIIHRDIGVLELLESIGL
EHYRERGERLIQILEVDTNWRMFKLSDGQKRRVQLCMGLMKPFKVLLLDEVTVDLDVVAR
DRLFQFLDDETKQRECTVVYATHIFDGLAQWADEVIHLQDGRIAKMLDYGRDIEFTKDIE
GVQEQSASDNKPYKVVLGYMKSLYPLALHWLSRDQDAHHAA
NT seq 846 nt   +upstreamnt  +downstreamnt
atgagtgacaagaatataaaggataacaacaacttggctgtagaagtgaaaaacctaacg
tatacattcccagagggtaaagcagcttcgatcatagacctgtcacttagtatcaagtgg
aataaaaaagttctagtggtaggtaataatggtgctggtaagtccacattactaaagctc
ttgagcgggaaacacttgtgtcttggaggagacattagggtcggaggaagaaacccattc
gcaccgaacaacgaccaggagtctgtcactttaactacatatttgggtaccgaatgggcg
agcatgtcaattattcaccgggacattggcgtgcttgagttgctagagagcataggtctt
gagcattacagagagcgtggggaaaggttgatccagatcttggaagtggacaccaactgg
cgaatgttcaagctcagcgacggacaaaagagacgtgtgcaattgtgcatggggcttatg
aaaccgttcaaagtcctactgttggacgaagtgactgtcgatttggatgtcgttgcacgt
gaccgccttttccaattcctagacgacgagacaaaacaaagagagtgcaccgtggtgtat
gcaacccatattttcgacggattggcccagtgggccgacgaagtgatccacctccaggat
ggtcgcatagccaaaatgttggactatggacgtgatatcgagtttacgaaagacatagaa
ggcgtgcaggagcaaagtgcctcggataataagccatacaaagtcgttctaggatacatg
aaaagtttgtacccattggcgttgcactggctctcgcgagaccaggacgcacatcacgct
gcgtga

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