Entry |
|
Symbol |
CAF16
|
Name |
(RefSeq) CCR4-associated factor 16
|
KO |
K12608 | CCR4-NOT complex subunit CAF16 |
|
Organism |
kmx Kluyveromyces marxianus
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:kmx00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLMA_20309 (CAF16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:kmx03019]
KLMA_20309 (CAF16)
Messenger RNA biogenesis [BR:kmx03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
KLMA_20309 (CAF16)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:complement(663708..664553)
|
AA seq |
281 aa
MSDKNIKDNNNLAVEVKNLTYTFPEGKAASIIDLSLSIKWNKKVLVVGNNGAGKSTLLKL
LSGKHLCLGGDIRVGGRNPFAPNNDQESVTLTTYLGTEWASMSIIHRDIGVLELLESIGL
EHYRERGERLIQILEVDTNWRMFKLSDGQKRRVQLCMGLMKPFKVLLLDEVTVDLDVVAR
DRLFQFLDDETKQRECTVVYATHIFDGLAQWADEVIHLQDGRIAKMLDYGRDIEFTKDIE
GVQEQSASDNKPYKVVLGYMKSLYPLALHWLSRDQDAHHAA |
NT seq |
846 nt +upstreamnt +downstreamnt
atgagtgacaagaatataaaggataacaacaacttggctgtagaagtgaaaaacctaacg
tatacattcccagagggtaaagcagcttcgatcatagacctgtcacttagtatcaagtgg
aataaaaaagttctagtggtaggtaataatggtgctggtaagtccacattactaaagctc
ttgagcgggaaacacttgtgtcttggaggagacattagggtcggaggaagaaacccattc
gcaccgaacaacgaccaggagtctgtcactttaactacatatttgggtaccgaatgggcg
agcatgtcaattattcaccgggacattggcgtgcttgagttgctagagagcataggtctt
gagcattacagagagcgtggggaaaggttgatccagatcttggaagtggacaccaactgg
cgaatgttcaagctcagcgacggacaaaagagacgtgtgcaattgtgcatggggcttatg
aaaccgttcaaagtcctactgttggacgaagtgactgtcgatttggatgtcgttgcacgt
gaccgccttttccaattcctagacgacgagacaaaacaaagagagtgcaccgtggtgtat
gcaacccatattttcgacggattggcccagtgggccgacgaagtgatccacctccaggat
ggtcgcatagccaaaatgttggactatggacgtgatatcgagtttacgaaagacatagaa
ggcgtgcaggagcaaagtgcctcggataataagccatacaaagtcgttctaggatacatg
aaaagtttgtacccattggcgttgcactggctctcgcgagaccaggacgcacatcacgct
gcgtga |