Kluyveromyces marxianus: KLMA_50176
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Entry
KLMA_50176 CDS
T05269
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03018
RNA degradation
kmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLMA_50176 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
KLMA_50176 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_50176 (LSM3)
03041 Spliceosome [BR:
kmx03041
]
KLMA_50176 (LSM3)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KLMA_50176 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
KLMA_50176 (LSM3)
Spliceosome [BR:
kmx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
KLMA_50176 (LSM3)
Complex C
U2 snRNP components
KLMA_50176 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
34716788
NCBI-ProteinID:
XP_022676645
UniProt:
W0TBR8
LinkDB
All DBs
Position
5:366180..366431
Genome browser
AA seq
83 aa
AA seq
DB search
MSDTPLDLLKLNLDGRVYVKLRDARELVGTLQAFDSHCNIVLSDAKETIYELEDGELKST
EKFAEMIFVRGGLVTLVTTPEDE
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacaccactggatttgttgaaattgaatctagacggtagagtctacgtaaaa
ttacgtgacgcccgtgaacttgtgggtacattgcaggcttttgattcgcattgcaatatt
gtgctttcagatgctaaagagactatctatgaattagaagatggggaactgaagagcaca
gagaagtttgcagagatgatatttgtaagaggtggcttggtgacacttgtaacgactccg
gaagacgagtga
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