KEGG   Komagataeibacter nataicola: B0W47_03735
Entry
B0W47_03735       CDS       T04737                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
kna  Komagataeibacter nataicola
Pathway
kna03030  DNA replication
kna03410  Base excision repair
kna03420  Nucleotide excision repair
kna03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B0W47_03735
   03410 Base excision repair
    B0W47_03735
   03420 Nucleotide excision repair
    B0W47_03735
   03430 Mismatch repair
    B0W47_03735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kna03032]
    B0W47_03735
   03400 DNA repair and recombination proteins [BR:kna03400]
    B0W47_03735
Enzymes [BR:kna01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     B0W47_03735
DNA replication proteins [BR:kna03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B0W47_03735
DNA repair and recombination proteins [BR:kna03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     B0W47_03735
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B0W47_03735
   MMR (mismatch excision repair)
    DNA ligase
     B0W47_03735
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      B0W47_03735
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 DNA_ligase_ZBD PTCB-BRCT RNA_ligase DUF4796_N
Other DBs
NCBI-ProteinID: AQU86719
UniProt: A0A9N7CLQ5
LinkDB
Position
765253..767397
AA seq 714 aa
MAAAPTDELAAQARALLADYAADAQTEAHAAATLTQLAALLPALDAAYHQHDAPVVDDAT
YDALRRLNTRLELEFPRHALAHSPSATVGAPASGPFRRHRHMVPMLSLDNVFSREEFEGF
VSRIARFLGLGDEQARALSFVAEPKIDGLSISLTYVHGRFVRGTTRGDGTEGEDVTANLR
TLRDIPNQLATPFPDTIEIRGEIFLSKQAFLELNAAQEEAGEKPFANPRNAAAGSLRQLD
PTITAKRPLSLFAYAAGYCDAPLAATHHGYLEQLRIWGFQVNPLSTQVKDAQAAEAFMER
LTRERSGLDYDIDGVVYKLDDRALQERLGFAGRAPRWAVAWKFPAEQAITRLEKIDIQVG
RTGALTPVAFLEPVNVGGVIVTRASLHNEDEIARKDIRVGDLVHVQRAGDVIPQITGVVL
PRDRETQPFAFPHTCPACGAHAERPEGEVVWRCSGGLTCPAQVMERLIHFVSRDAFDIDG
LGDRTIVEFHELGWLRTPADIFRLGAHEEDIAARDGWGKVSARNLVNAIAARRTIELSRL
IYALGIRRIGTSNARLLARHYGSLANWRTQMEKAAVVGSDERLELGSITGIGTTIADELV
AFFAEAHNRATLDDLTGELTRVLDEEAPEEGNLSGKTIVFTGTLTTMTRPEARAVAERLG
ARVSDSVSKKTDLVVLGEKAGSKARKATELGIETMDEASWRILADMPPAPEAEG
NT seq 2145 nt   +upstreamnt  +downstreamnt
atggccgccgccccgaccgatgaactggccgcgcaggcccgcgcgctgctggccgattac
gcggcagacgcgcagactgaagcccatgccgcagccacgctgacgcagcttgccgccctg
ctgccagcactcgatgccgcctaccaccagcacgatgcgccggtggttgatgatgcgacc
tatgacgcgctgcgccgcctgaacacgcggctggagctggaatttccccgccacgccctg
gcccacagccccagtgccacggtgggggcaccggccagcggccccttccgccgccaccgg
cacatggtgccgatgctgtcgctggacaatgtgttctcgcgggaggaattcgagggcttt
gtcagccgtattgcccgttttcttggcctgggcgatgagcaggcacgcgcgctttccttc
gtggcggaacccaagatcgatggcctgtcaatcagcctgacctacgtgcacgggcgtttc
gtgcgcggcaccacgcgcggcgacggcacggaaggcgaggacgtaaccgccaacctgcgc
acattgcgcgatattcccaaccagcttgccactcccttccccgacacgatcgagatccgg
ggcgagattttcctgtccaaacaggcgtttcttgaactgaacgcagcacaggaagaagcg
ggcgagaagccatttgccaacccgcgcaatgctgccgcaggctcgctgcgccagctagac
cccaccattacggcaaaacgtccgctctcgctgtttgcctatgccgcgggctattgcgat
gcaccgcttgccgccacgcatcatggctatctggaacagcttcggatctggggttttcag
gtcaacccgctaagcacgcaggtcaaggacgcacaggccgccgaagccttcatggagcgc
ctgacgcgcgagcgctcggggctggattacgacattgacggcgtggtgtacaagcttgac
gaccgcgcattgcaggagcgcctgggctttgcggggcgtgcgccccgctgggcggtggcg
tggaagttccccgccgagcaggccattacccggctggaaaagatcgacattcaggtgggc
cgcaccggcgcgctgacgcctgtggcctttttggagccggtcaatgtgggcggcgtgatc
gtgacccgcgccagcctgcataatgaggatgaaatcgcgcgcaaggacatccgcgtgggc
gaccttgtgcatgtgcagcgcgcgggcgatgtgattccgcagataaccggcgtggtgctg
ccgcgtgaccgtgaaacgcaacccttcgcctttccccatacctgcccagcctgcggggca
catgccgagcggcccgagggcgaggtggtctggcgctgctcgggcgggctgacctgcccc
gcgcaggtgatggagcggctgatccatttcgtctcgcgtgatgcgttcgatattgatggc
ctgggcgatcgcaccattgtcgagttccatgaactcggctggctgcgcacgccagccgat
atcttccgccttggtgcacatgaggaagatatcgcggcccgtgacggctggggcaaggtc
tcggcgcgcaatctggtcaacgcaatcgccgcccggcgcaccattgaactctcgcgcctg
atctatgcgctgggcatccgccgcattggcaccagtaatgcacgcctgctggcgcggcat
tatggttcgctggccaactggcgcacgcagatggaaaaggccgccgtcgtagggtcggac
gagcggctggagctcggctcgatcaccggcatcggcacgaccattgccgatgaactggtc
gccttctttgccgaggcccataaccgcgcgacccttgatgacctgaccggcgaactgacc
cgcgtgcttgatgaggaagcacccgaggaaggcaacctgtcgggcaaaaccatcgtgttt
accggcacgctgaccaccatgacccgccccgaggcccgtgccgtggccgagcggctgggc
gcacgggtgtcggacagtgtctcgaaaaagaccgaccttgtggtgctgggtgaaaaagcg
ggctccaaggcgcgcaaggccaccgaactgggcattgaaaccatggatgaggcaagctgg
cgcatccttgcggacatgccccctgcccctgaggccgagggctga

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