Kwoniella newhampshirensis: 92179992
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Entry
92179992 CDS
T10314
Symbol
IAR55_002734
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
kne Kwoniella newhampshirensis
Pathway
kne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92179992 (IAR55_002734)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kne03041
]
92179992 (IAR55_002734)
Spliceosome [BR:
kne03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
92179992 (IAR55_002734)
Complex C
U5 SnRNP specific factors
92179992 (IAR55_002734)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
MMR_HSR1
EFL1
EFG_III
Septin
EF-G_D2
SRPRB
Motif
Other DBs
NCBI-GeneID:
92179992
NCBI-ProteinID:
XP_066803348
UniProt:
A0AAW0Z026
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Position
5:complement(403986..407735)
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AA seq
992 aa
AA seq
DB search
MSTEDYDEFGNYIGGDLESDDDSDIDVVPSAPSASGPSAPAQAYAPLEGFDDEDEAMEDE
DAGMQMTLHGVDGTAGNQVVLHEDKKYYATAEETYGADVEAMVQEEDAQPLSEPIVAPIK
VKQFTVQEKDLPVTRFDRNFMIDLMNYPSMIRNVMVAGHIHHGKTSLLDMLVFETHQLTW
DVDRPTRYTDTHTLTRSRELSIKSGPMSLVLQDSKGKSSLINIIDTPGHANFVDEVASVA
RLVDGAVIVVDVVEGVMHGTEAVIRHAIQEKLKLVLVVNKMDRLILELRLPPSEAFFKIK
HTIEEVNSIIAAIDPDDSLRLSPERGNVAFASTQMGWCFTLRTFASMYADTFGSFDVDDF
AARLWGNIFFDSEKRKFTRKPADVESKRSFVHFILEPLYKLYTQVLSEDSATLKETLAGL
RITLRPAAYKMDVRPLLKVVLEAFFGPSVGLVDMITEFIPSPVDAAEEKIRHTYTGPLTS
DLADSMVKCDAQGPTVVHITKLFHTTDAEQFRAFGRVMSGTVRIGQAVKVLGEGYSLEDE
EDMITAHVEGVMIDESRYTVDIERAPAGNLVLLAGVDASVSKTATIVAKDTEEDLYIFRP
IKHMTTSVLKVAVEPIAPSELPKMLDGLRKINKSYPLVTTKVEESGEHIILGTGELYMDS
VLHDLRRLFSEIEIKVSDPVTKFCETVVETSALKCYAETPNKKNKLTMISEPLETGIAND
IEAGRVTMKMTNKERGKFFESKYQWDVLASRNIWAFGPEENGANVLINDTLPSEVDAKLL
SSVRESVKQGFQWGTREGPLCDEPIRGVKFRILDASLAQEPIYRGGGQIIPTARRVCYSS
FLLATPRLLEPVYYVEVQAPADCVAAVYTVLSRRRGHVTRDIPKPGSPLYTVKAFIPVLD
ANGFETDLRTATLGQAFCQMSFDHWSVVPGDPTDSSIQLRPLEPATGQALARDLVLKTRR
RKGLSDSIAVSKYLEDETIIAISASGNADLLG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagaagattacgacgagtttggtaactacattggcggtgatctcgaatctgac
gatgattccgacatcgacgtcgtcccatctgctccctctgcttccggaccctctgccccg
gcgcaagcttatgcacctctcgaaggatttgatgatgaggacgaggccatggaagacgag
gatgcagggatgcagatgacattgcatggtgtggacggcacggcgggaaaccaggtggtc
ttgcatgaggacaagaaatactacgcgacagcagaggagacttatggagcagatgtggag
gcaatggtccaggaagaggacgctcaaccactttctgaaccgattgtcgcgcccataaag
gtgaagcaattcacagtgcaggagaaggatttgccggtcacgcggttcgacagaaatttt
atgatcgacctaatgaactatccttctatgattcgaaacgtcatggttgcaggacatata
catcatggaaagacgtcattgctggatatgttggtatttgagacacatcagttgacatgg
gatgtggacagaccaacaagatataccgatacccatactctcactcgatcgcgggaactt
tccattaagtctggacctatgtctctcgtcctccaggactcgaaaggcaaatccagtctt
atcaacatcatcgacacccctggacatgccaactttgtggacgaggtcgcgtcggttgca
cgactggtagacggtgccgttatcgtcgtcgatgtggtggaaggtgtcatgcacgggaca
gaagcggtgatcagacacgcgatccaggagaagttgaagttggttttggtagtcaacaag
atggatagattgattttggagttgagattaccgccaagcgaggctttcttcaaaatcaaa
cataccatcgaagaggtcaattccatcattgctgccattgacccggacgactctttacgt
ctgtcacccgaaagaggcaacgttgccttcgcctccactcaaatgggatggtgcttcact
ctccgtactttcgctagcatgtacgccgatacattcggctctttcgacgtcgacgatttc
gctgctcgactatggggcaacatcttctttgactccgaaaagcgaaagttcacacgaaaa
cctgcagacgttgaatcaaaacggtcgttcgtgcacttcatccttgagccgttgtacaaa
ttgtatacacaggttttgagcgaggactcggcgacattgaaggagaccctagcgggctta
cggataacgctcaggcccgctgcttataagatggatgttagaccgttattaaaggtggtt
ctggaggcattcttcgggccatcggttggactggtggacatgatcaccgagttcatccct
tcacccgtcgatgccgccgaggagaagatccgacatacttacaccgggccccttacctct
gatcttgcggactcaatggtcaaatgcgacgcacaaggacctaccgttgttcacatcact
aaacttttccacactaccgatgctgagcagttcagggcatttgggagagtgatgagcggt
actgtacgaataggacaagcggtcaaggtcttaggagagggctattcgttggaggatgag
gaagacatgatcacagcccacgtcgagggagtgatgattgatgagtcaagatataccgtt
gacattgagcgagcacccgctggtaaccttgtcttgcttgcgggtgttgacgcctcagta
tcgaagactgctacaatcgttgccaaagataccgaggaggatctttacatattccgacca
atcaaacacatgaccacatcggttctcaaagtcgctgttgaacctatcgctccgtcagaa
ttaccgaaaatgctcgacggtctcagaaaaatcaacaaatcataccctctcgttacgact
aaggtggaagagtccggagagcatatcattctgggcactggagagctgtacatggactcg
gtcttgcacgacttgcgaagattgttctcggagatcgagatcaaggtatccgatcctgtg
acaaaattctgcgagacggtagtggagacctctgccttgaagtgttatgccgagaccccg
aacaagaaaaacaagctcaccatgatctcagaacctcttgagacgggtattgcgaacgat
attgaagctggacgagtgacaatgaagatgacgaacaaggagcgagggaagttcttcgag
agcaaatatcagtgggatgtactggcgtcgagaaatatctgggcttttggaccagaagag
aacggtgcgaatgtcttgatcaacgatactctgccgtcagaggttgacgccaaactactg
agcagtgtgagggaaagtgtgaagcagggattccaatggggaacccgagaaggaccgttg
tgtgatgagcccattcgaggtgtgaagttcaggatcttggatgcgtctctcgcacaagaa
ccaatctaccgaggaggtggtcaaataattcccacagctcgacgagtgtgctattcctca
ttcctccttgcgactcctcgactccttgaacccgtgtactacgtcgaagtccaagcacca
gccgattgtgtcgctgccgtctacactgtcctttctagaagacgaggacacgtcacgaga
gatatacccaagccaggatcacctctgtatactgtcaaagcattcattccggtcctcgac
gcgaatggtttcgagacagatcttcgaacagcgaccttaggtcaggcattctgtcagatg
agcttcgaccattggagcgtggtacctggtgaccctaccgacagttcgatccagcttaga
ccgcttgagcctgctacaggacaagcattggcgagagatttggtgttaaagactagaaga
agaaaaggattgagcgatagcattgccgtgagcaagtacctggaagatgagaccatcatt
gcgattagtgcatcgggtaatgcggacttgttagggtaa
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