KEGG   Kwoniella newhampshirensis: 92181626
Entry
92181626          CDS       T10314                                 
Symbol
IAR55_004368
Name
(RefSeq) hypothetical protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
kne  Kwoniella newhampshirensis
Pathway
kne03018  RNA degradation
kne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    92181626 (IAR55_004368)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    92181626 (IAR55_004368)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kne03019]
    92181626 (IAR55_004368)
   03041 Spliceosome [BR:kne03041]
    92181626 (IAR55_004368)
Messenger RNA biogenesis [BR:kne03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     92181626 (IAR55_004368)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     92181626 (IAR55_004368)
Spliceosome [BR:kne03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    92181626 (IAR55_004368)
 Complex C
  U2 snRNP components
    92181626 (IAR55_004368)
SSDB
Motif
Pfam: LSM SM-ATX RimP_C
Other DBs
NCBI-GeneID: 92181626
NCBI-ProteinID: XP_066801881
LinkDB
Position
8:complement(<455189..>455982)
AA seq 95 aa
MDDATTAGISEPLDLVKLSLGERVFIKLRGDRTVTGVLHAYDAHMNVVLSQVEETIHFVD
VTEDGQPLPPRAERRNVEMLFVRGDGVILISPAQQ
NT seq 288 nt   +upstreamnt  +downstreamnt
atggacgacgctaccaccgctggtatctcagaaccactcgacctcgtcaagttgtctctg
ggcgaacgagtgttcatcaaacttcgaggagacagaacggtcactggtgttcttcacgct
tatgacgcacacatgaacgtcgtcctctcacaagtcgaagagacaatccatttcgttgac
gtcacagaggatggacaaccgttacccccaagagcagaaagacggaatgtggaaatgctg
ttcgtcagaggagacggtgtgatcttgatctcaccagcacaacaataa

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