Kwoniella newhampshirensis: 92181626
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Entry
92181626 CDS
T10314
Symbol
IAR55_004368
Name
(RefSeq) hypothetical protein
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
kne Kwoniella newhampshirensis
Pathway
kne03018
RNA degradation
kne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92181626 (IAR55_004368)
09123 Folding, sorting and degradation
03018 RNA degradation
92181626 (IAR55_004368)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kne03019
]
92181626 (IAR55_004368)
03041 Spliceosome [BR:
kne03041
]
92181626 (IAR55_004368)
Messenger RNA biogenesis [BR:
kne03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
92181626 (IAR55_004368)
mRNA degradation factors
5'-3' decay
Lsm complex
92181626 (IAR55_004368)
Spliceosome [BR:
kne03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
92181626 (IAR55_004368)
Complex C
U2 snRNP components
92181626 (IAR55_004368)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
RimP_C
Motif
Other DBs
NCBI-GeneID:
92181626
NCBI-ProteinID:
XP_066801881
LinkDB
All DBs
Position
8:complement(<455189..>455982)
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AA seq
95 aa
AA seq
DB search
MDDATTAGISEPLDLVKLSLGERVFIKLRGDRTVTGVLHAYDAHMNVVLSQVEETIHFVD
VTEDGQPLPPRAERRNVEMLFVRGDGVILISPAQQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgctaccaccgctggtatctcagaaccactcgacctcgtcaagttgtctctg
ggcgaacgagtgttcatcaaacttcgaggagacagaacggtcactggtgttcttcacgct
tatgacgcacacatgaacgtcgtcctctcacaagtcgaagagacaatccatttcgttgac
gtcacagaggatggacaaccgttacccccaagagcagaaagacggaatgtggaaatgctg
ttcgtcagaggagacggtgtgatcttgatctcaccagcacaacaataa
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