Kwoniella newhampshirensis: 92182162
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Entry
92182162 CDS
T10314
Symbol
IAR55_004904
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
kne Kwoniella newhampshirensis
Pathway
kne03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
92182162 (IAR55_004904)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kne03400
]
92182162 (IAR55_004904)
Enzymes [BR:
kne01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
92182162 (IAR55_004904)
DNA repair and recombination proteins [BR:
kne03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
92182162 (IAR55_004904)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
92182162
NCBI-ProteinID:
XP_066801457
UniProt:
A0AAW0YIS7
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Position
9:complement(557012..560716)
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AA seq
959 aa
AA seq
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MDIPFESFAKLIYRLGDPPKSKKTAKPIPPDKIFSSWLNHLPKPLPHLAAKQIFRLLFPH
EGSRRRYGLKETKLAQELERLLGLGGLTRWDSVSWDRGGKSGTGCLGREVEVAMKERVAS
SSTSPARDRSTLSIRELDGLLDELAASSPFSQLSQSPIPARSTSTLLAILYRDSSLSPYA
LSVLTQIILRDLRPLLSPLPLLPIRNPTAMLRLKSTAGPEQLTLRDAMISWDKKMWDLYV
GGRGDLDTCADLVDAIHSDGPGFVSCEPVIGVNVKIPKCRKGRSVEDALKEFTGTQYAPA
SETVWAETKYDGYRLQIHVEIIKGHAPSITIFSKSTRNSTQDRLYAHAIILATLGLPVNP
RLPAHPSLAQRVSTLPRRAAVVKKSVILEAEVVSYNENSREGGRGSGIEEFWWLGQAGVT
HDAMNWAYSDTGFPKTSSRHLCLVFFDVLHLDGRSLLHHQYEGRRRTLETVLTVIPGFAQ
LADRIKISLNHSRDSALGALRTAFEKSSAHREEGLVLKAAESTYANMRWQWVKLKKDYIP
NLGDCIDLVLLGAGWDSDRARELRVDTSVFTTFYIGALTNCDKAKSRTEMPHFEILFKAS
YGLDRSQLEVYNDCIRHGRWGSKPFDRDDPFKRRLLGLSWTYTLQRGMTPPSVLFVQPMC
AEVMGAGFQRLPGSYLYELRWPRLQKVHAPYDRSWTEALNAQSLVRTAHQSLGYDLSATF
GRLTSPRSPDDSIRAAWRSSTSIALIDVPELVSPRSPRRARSAPDLTKVWKKSPETPRSS
PKRLKAIGPETGSGRRLRDVMSDVALNLDNRIDGEVEKEGVNWLRSPIKRLGEDIRSHGS
LSKRMKQDRMVVQQRSPTSPRILSELDPPGNRSQSAKSPARFPTLPHYHSPSVSPLKPAR
RLFTSIDWSCLSSHLNQPVGADTPRRNDISQWKGRRALSLRSRIKLANRGISVRSSMLE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggacatcccgttcgagagctttgcaaaattgatttatcgattgggcgaccctcctaaa
tcgaagaagactgcgaaacccatcccacctgataagatattctcctcatggctcaatcac
cttccgaaaccactgccacaccttgcggcaaagcagatattccgactgctcttcccacat
gaaggatcgagacggagatatggtctgaaagaaacgaaacttgcgcaggagctggagagg
cttttgggtctcggaggcttgacaagatgggatagcgtctcatgggatcgaggtggaaaa
tcagggactgggtgtctaggacgagaggttgaggtcgctatgaaggagcgggtggcatct
tcgtctacctctccggccagagatagatcgactctatcgatccgggagctcgatggcctg
ttagacgaattggcagcgtcttccccgttttctcagctatcccagagccctatacctgcc
cgatcgacctccacacttctggccatcttgtatcgagactccagtctctcaccctatgca
ctctcggtcctaacgcagatcatacttcgagatttgagacctttactcagtcccctgcct
cttctacctatccggaatcccaccgcgatgctcagactcaagtcgactgcgggtccagaa
cagttgactcttcgtgatgccatgatttcatgggacaagaaaatgtgggatctctacgtg
ggtggacgaggtgacctcgatacttgcgcagatctcgtggacgcgatacatagcgatgga
ccaggcttcgtgtcctgcgagcctgtgattggagtcaatgtcaagattcccaaatgcagg
aaaggcagatcggtcgaagatgccctcaaggagttcacgggtactcagtacgcgcctgct
tcggagactgtatgggcagagaccaaatacgatggttatcggctgcagattcatgttgaa
attatcaaaggacacgcacctagtataacaatattcagtaagtctacacgaaatagtaca
caagataggctgtatgcccatgcgataattctggcgacattaggccttcccgtcaaccca
agactacctgcgcatccgtcgttggctcagcgagtttctacccttcccagaagagctgct
gttgttaaaaagtctgtcatcctcgaagctgaggtggtgtcgtacaacgagaattctcga
gaaggcggtcgtggttctggtatagaagagttttggtggcttggtcaagcaggtgtgacc
cacgacgctatgaactgggcatactccgataccggatttccaaaaacgtccagtagacat
ttatgcttagtcttcttcgacgtgcttcatctcgatgggcgaagcctgctgcatcatcaa
tacgagggtaggcgtagaacgctcgagacggtgttgacggtaatccctggatttgctcaa
ctcgccgatcgaatcaagatatcattaaaccatagccgtgactcagctcttggcgctcta
cgaactgcattcgagaaaagtagcgcgcatcgagaggagggcttggtcttgaaggctgct
gaatcaacgtacgcaaatatgcgttggcaatgggtaaagctcaagaaagattatatacct
aatctgggagattgtatcgaccttgttctactcggtgcaggttgggattccgatcgagca
agggaacttcgagtggacacatcagtcttcacgacattctacattggcgctttgaccaac
tgcgacaaggccaaaagtcgaacagagatgccacactttgagatcttattcaaagcgtcg
tacggacttgatcgaagtcagctcgaagtctacaacgattgcatcaggcacgggagatgg
ggcagcaagcccttcgatagggatgatcccttcaaacgaaggttgttgggcttgtcttgg
acttatacattgcaaagaggcatgacacctccatctgttctgtttgtccaaccgatgtgt
gcagaagtgatgggcgcggggtttcagcgactacctggctcatacctgtatgagcttcgc
tggccaagacttcaaaaggttcatgcaccgtacgatcgatcgtggacggaagctcttaac
gcgcaatcactggttcggacagcccatcaatcgctaggctacgatctgagtgccactttt
ggacgtttgacgtctccacgatcacctgatgattcgatacgagcagcttggcgatcgagt
acgagtatcgcgcttattgatgtaccggaactagtctcgcctcgttcaccacgacgagct
agatcggcgcctgatctgacaaaagtatggaaaaagtctcctgagacgccgagatccagt
ccgaagaggctaaaggccatcgggccagaaacaggaagtgggagacggttgagggatgtg
atgagtgatgtcgctctcaatttggacaatcggattgatggagaggtcgaaaaggaaggc
gttaactggttgagaagtcctatcaagagacttggcgaggatatacgctctcatggaagt
ctctcaaaacgaatgaaacaggatcgaatggtagtacagcaaagatctccaacttctccc
aggatcctgtctgagctcgatccgcccggaaaccgatctcaatcagccaaatcgccagct
cgcttcccaacccttcctcactatcactctccatcggtatcgcctctcaaacctgcgaga
cgattattcacctccatcgattggtcctgtctgtcttcacacttgaatcaacctgttggc
gccgataccccacgtcgtaacgatatcagtcagtggaaagggagaagagcattgtcgttg
aggtcgaggatcaagttggcgaaccggggaatcagtgtgagatcttcaatgttggaatga
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