Knoellia sp. S7-12: V6K52_03000
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Entry
V6K52_03000 CDS
T10549
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
kno Knoellia sp. S7-12
Pathway
kno03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6K52_03000 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kno03400
]
V6K52_03000 (nth)
Enzymes [BR:
kno01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V6K52_03000 (nth)
DNA repair and recombination proteins [BR:
kno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V6K52_03000 (nth)
Prokaryotic type
V6K52_03000 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
XAU40038
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All DBs
Position
622832..623629
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AA seq
265 aa
AA seq
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MPASTASPAAVYAAESPVARTRRARKIYRALVDRYPYAHAELDFETPLQLLLATVLSAQT
TDITVNKVTPELFSRWPTAEALAAADRDEMEAVLKPTGFFRAKTNSVITLSQALVDRFGG
EVPPRLKDLVTLPGVGRKTANVVLGNAFGVPGITVDTHFGRLVRRFGWTEETDPVKVEHA
IGALFPRKDWVMLSHVLIFHGRRTCHARRPACGACPVSQWCPSYGEGETDPVTALKLLKY
ELAPGAELPDPPPGPLPGETRETLA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgcctccaccgcttcgcctgccgccgtgtatgccgctgaatcacctgtcgcgcgg
acgcgtcgggcccgcaagatctatcgggcgttggtcgaccgctatccctatgcccatgcc
gagctcgacttcgagacgcccttgcagctgctcctcgcgacggtgctgtcggcccagacg
acggacattaccgtcaacaaggtgacgcctgagttgttctcgcgctggcccactgcggag
gcgctcgcagctgctgaccgtgacgagatggaggcagtgctcaagccgacgggcttcttc
cgggccaagaccaactcggtcatcacattgagccaggccctggtcgaccggttcggcggc
gaggtcccaccgcggctcaaggacctcgtgaccctgcctggcgtggggcgcaagacggcc
aatgtcgtgctcggcaacgcgttcggggtcccgggcatcactgtggacactcacttcggt
cgactggtgcgacgtttcggctggacggaggagacggacccggtcaaggtcgagcacgcg
atcggcgccctgttcccgcgcaaggactgggtcatgctcagccacgtcctcattttccac
gggcggcgcacctgtcacgcgcgtcggcctgcgtgtggggcctgccccgtgtcgcagtgg
tgcccgtcctacggcgagggcgagaccgatccggtgacggccctcaagctgctcaagtac
gaactggccccgggcgccgagctgcccgacccgccgcccggaccgctcccgggggagacg
cgggagactctggcgtga
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