Kosakonia sp. SMBL-WEM22: HF650_00340 Help Entry HF650_00340       CDS       T08549                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism kob  Kosakonia sp. SMBL-WEM22 Pathway kob03030   DNA replication kob03410   Base excision repair kob03420   Nucleotide excision repair kob03430   Mismatch repair Brite KEGG Orthology (KO) [BR:kob00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     HF650_00340 (ligB)    03410 Base excision repair     HF650_00340 (ligB)    03420 Nucleotide excision repair     HF650_00340 (ligB)    03430 Mismatch repair     HF650_00340 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:kob03032]     HF650_00340 (ligB)    03400 DNA repair and recombination proteins [BR:kob03400]     HF650_00340 (ligB) Enzymes [BR:kob01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      HF650_00340 (ligB) DNA replication proteins [BR:kob03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      HF650_00340 (ligB) DNA repair and recombination proteins [BR:kob03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      HF650_00340 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      HF650_00340 (ligB)    MMR (mismatch excision repair)     DNA ligase      HF650_00340 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       HF650_00340 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_OB DNA_ligase_aden RNA_ligase DUF3701 Motif Other DBs NCBI-ProteinID:  QNQ22614 UniProt:  A0A7H0MK03 LinkDB All DBs Position 71168..72847 Genome browser AA seq 559 aa AA seqDB search MWRCVGVTIFLLLWSAFSLAACPVWSPSRAQDEVQRLKQQLSRWNEDYWSRGASEVSDDV YDRMSARLANWQHCFNMTSADLAPALSGGNHAHPVAHTGVRKLADKWALQQWMRGKQDLW VQPKVDGVAVTLVYRNGRLAQAISRGNGLAGEEWTAKAQAIPAIPKTVTGALADSVLQGE LYLRRKGHIQKQAGGLNARAKVAGAMMRHDNPELLNELAFFVWAWPDGPATLAQRLVVLK KAGFEEAHYYSAPVNSVQDVERLRQHWFTSPLPFVTDGVVVRTSAEPAGKAWLPGQSDWV VAWKYEPVEEVAAVQDIQFAIGRTGKISVVALLEPVKLDDKRVQRVNIGSVQRWQALDIA PGDHIAVTLAGQGIPRVERVVWRNLVRKPPTPPEARFTPLSCFYTTPDCQQQFIARLSWL SSDKALDITGLSESGWRTLHQAHHFEHLFSWLTLTKEQLQTTPGMSPTRGLQLWHRFSLT RERPLSRWLHALGAPLPQSAINAAGDISWRQMRSRDELAWQQLPAIGTQKARQVVAFIRA PVIEQLTSWLAKQGVKAFQ NT seq 1680 nt NT seq  +upstreamnt  +downstreamnt atgtggagatgtgttggggttaccatttttctactgctatggagtgcgtttagcctggcg gcttgtccggtctggtcaccatcacgggcgcaggatgaggtacagcgcctgaaacagcag ctcagcagatggaacgaagattactggtcaagaggcgcaagcgaggtgagcgatgatgtt tacgatcggatgagcgcgcgcctggcgaactggcagcactgtttcaacatgacatccgca gaccttgcgccagctttgtcgggcggcaatcatgctcatccggttgcccataccggggtg cgtaagctggccgataaatgggccctgcagcagtggatgcgcggaaagcaggatctttgg gtgcagccaaaagtggatggcgttgccgtcacgctggtctatcgcaacggcaggctggca caggcgatcagccggggtaatggccttgcgggcgaggagtggacagcaaaggcgcaggcc attcccgcgatcccaaaaaccgttaccggtgcattggcggatagcgtcctgcagggtgag ctctatttacgccgcaagggacatatccaaaaacaggccggtgggcttaatgccagggca aaagtcgccggcgcgatgatgcggcacgacaacccggagctgcttaatgagcttgctttt tttgtctgggcctggcccgatggccctgccaccttggcgcagcggttggtggtactgaaa aaggcgggctttgaagaggcgcactactacagcgcaccggtcaacagcgtgcaggacgtt gagcgtcttcgtcagcactggttcacttcgccgctgcccttcgtcacggatggcgtggtg gtacgcacaagtgcggagcctgcgggcaaagcgtggttacccggtcaaagtgactgggta gtagcctggaagtatgaaccggtagaagaggtggcagcggtacaggatattcaatttgca atcgggcggaccgggaaaatctccgttgtcgcgctgctggagccagtaaaacttgatgat aagcgcgtgcagcgcgtgaatattgggtcggttcagcgctggcaggcgttagatatcgca ccgggcgatcatattgccgtcacccttgccgggcaggggatccctcgcgtggagcgcgtg gtctggcgtaaccttgttcgaaagccgcccacaccgccggaagctcgttttacaccgctg agctgcttttataccacgccggattgtcagcaacagtttattgcccgcctctcctggctc agttcggacaaggcgctcgacatcaccggattgagtgaaagcggctggcggactctgcat caggcgcaccattttgagcatctattctcctggcttacgctaacaaaagagcagttgcag accacacccggaatgtcgcccacgcgcggcctgcaactctggcatcgtttttccttaacg cgtgagaggccattaagccgctggcttcatgcgctcggtgcgccgctgccgcaatcggcg atcaatgcggcgggcgatatctcatggcggcagatgcgcagccgggatgaactggcctgg caacagctgcccgccatcggtacacaaaaagcacggcaggttgttgcttttatccgtgcg ccggtaattgagcagttgacgtcctggcttgcgaagcagggcgtaaaggcttttcagtga

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