Kosakonia sp. SMBL-WEM22: HF650_10620
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Entry
HF650_10620 CDS
T08549
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
kob
Kosakonia sp. SMBL-WEM22
Pathway
kob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HF650_10620 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kob03400
]
HF650_10620 (nth)
Enzymes [BR:
kob01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HF650_10620 (nth)
DNA repair and recombination proteins [BR:
kob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HF650_10620 (nth)
Prokaryotic type
HF650_10620 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QNQ20176
UniProt:
A0A7H0MD15
LinkDB
All DBs
Position
complement(2233406..2234038)
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AA seq
210 aa
AA seq
DB search
MNKAKRLEILTRLRENNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATALLYPVANT
PQAMLELGVDGVKQYIKTIGLYNSKAENVIKTCRILLEKHGGDVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTRFAPGKNVEEVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYDSKTD
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcgaaacgcctcgaaatcctcacccggctgcgggagaacaacccgcatccg
accaccgaactgaacttcacctcgccctttgagctgctcatcgccgtgctgctttcagcc
caggcgacggatgtcagcgtcaataaagcgacggcgctgctctacccggttgccaatacg
ccgcaggcgatgctggagctgggcgtcgatggcgtgaagcagtacatcaaaaccatcggc
ctttacaacagcaaagcggagaacgtcattaagacctgccgaattctgctggaaaaacat
ggcggtgacgtgccggaagatcgtgccgcgctggaagcgttaccgggcgtcgggcgtaaa
accgccaacgtggtactgaataccgcctttggctggccgactatcgccgtcgatacccat
attttccgcgtctcaaaccgcacgcgctttgcgccggggaaaaatgtcgaagaggtggag
gagaagttgctgaaagtggtgccggcagagttcaaggtcgactgccatcactggcttatt
ctgcacgggcgatacacctgcatcgcccgtaagccccgctgcggctcctgcattattgaa
gatttgtgcgaatacgacagcaagaccgattaa
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