Kocuria sp. KD4: HBK84_04895
Help
Entry
HBK84_04895 CDS
T06521
Name
(GenBank) multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
kod
Kocuria sp. KD4
Pathway
kod00020
Citrate cycle (TCA cycle)
kod00630
Glyoxylate and dicarboxylate metabolism
kod00785
Lipoic acid metabolism
kod01100
Metabolic pathways
kod01110
Biosynthesis of secondary metabolites
kod01120
Microbial metabolism in diverse environments
kod01200
Carbon metabolism
kod01210
2-Oxocarboxylic acid metabolism
Module
kod_M00009
Citrate cycle (TCA cycle, Krebs cycle)
kod_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HBK84_04895
00630 Glyoxylate and dicarboxylate metabolism
HBK84_04895
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HBK84_04895
Enzymes [BR:
kod01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
HBK84_04895
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
HBK84_04895
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
HBK84_04895
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
HBK84_04895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
KYNU_C
Motif
Other DBs
NCBI-ProteinID:
QIR69485
LinkDB
All DBs
Position
complement(1058937..1062887)
Genome browser
AA seq
1316 aa
AA seq
DB search
MPDQPRHLIPEEFAGNEWLVDELFDKYQADKNSVDKKWWPIFEQMAGDDQSDTQTSDTKT
SAAAPSQGAAARTSGGDRPAVRRDDAAARTSADKAASGTFGENKPASGTASTSSKTEQNT
SGAGAEAPRKAQRAKSPAPSTTGSKAKGRPEGVDTETETSEGSGTKRPIRAQPEDRAKDK
SQDKPAEDTVVKLRGPAKAVAANMDASLTVPTATTVRAVPAKLLIDNRLVINSHLARNRG
GKVSFTHLVGYAVIRALANFPSQNVIYDEVDGKPAAVHPAHVNFGIAIDIPNKDGSRNLV
VPNIKGAEEMSFQQFWTSYEDIVKRGRNGALTMEDYAGTTVSLTNPGGIGTVHSVPRLSK
GQACIIGVGALDYPAEYKGASPRTIARNAVSKVITLTSTYDHRVIQGAGSGEFLKLVEHY
LLGGEDFYDHIFEALRIPYEPVRWAVDNQVNPEIQINKVARIQQLIHSYRVRGHLMADTN
PLEYVMRKHPDLDIRTYGLTLWDLEREWPTGGFGGQSLLTLRVILGRLRDAYCRTVGVEY
MHIQEPEQREWFQSKLERDYQKPAREEQFHILERLNAAEAFETFLQTKYVGQKRFSLEGG
ESLIPLLDAIISEAADASLAGVGIAMAHRGRLNVLTNIAGKSYAQVFREFEGSQDPRAAE
GSGDVKYHLGTEGVFTSDNGNETQVYLAANPSHLEAADPVIEGIARAKTDVLGAGPEGNG
EYPVLPIQVHGDAAMAGQGIVYEVMQMSGLEAYNVGGTIHVVVNNQVGFTTAPSAGRTST
YSTDVARTVQAPIFHVNADDPEAVARVAQLAFEYRQRFQRDVVIDLVCYRRRGHNEGDDP
SMTQPLMYSLIDGKRSTRKVYTENLVGRGDITQEEADRALKDYQERLERVFAETHEAQTS
TVPLVTGDAAAIANIERPSAQQADSGVSVPKTTAISEEAAHRIGDAYVDLPEGFTMHRKL
HKLAEKRREMTREGGIDWGMGELMAFGSLLMDGVPVRMSGQDVRRGTFTQRHAVFFDAEN
GAEWTPLNHLSADQARFSIYNSLLSEYGVLGFEYGYSVERPEALTVWEAQFGDFTNGAQT
IVDEFISSAEQKWGQRSNLVMLLPHGFEGQGPDHSSARIERFLVLCAEKNMIVAQPSTPA
NHFHLLRRQAYSRPRRPLIVATPKQLLRLKAAASPVEEFTQGGFQTVIPDTAGLDDAKVT
DVILVSGRLYYDLVTQQKKSDDHSTAIVRVEQLYPLPVDEIKEQLARYPEARILWAQDEP
ANQGAWPFMAVNLVPQLDRPVTLASRPASASPANGSAKRHTAELETLVQQAFARGE
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaccagccgcgtcaccttatccctgaagaatttgccggcaacgaatggctcgtg
gacgagttgttcgacaagtaccaggcggacaagaactcagtggacaagaagtggtggccc
atcttcgaacagatggccggtgacgaccagtccgatacccagacgtccgacaccaagacc
tcagcagccgccccgtcccagggggcggctgcgcggacgtccgggggtgatcgtcccgct
gtacggcgcgacgacgccgccgccaggacgtccgcggacaaggccgcctccgggacgttc
ggcgagaacaagcccgcctccgggacggcgtcaacctcgtccaagaccgagcagaacacc
tccggtgccggcgcggaggcgcccaggaaggcgcagcgggccaagtccccggcgccgtcg
accaccggatccaaggcgaagggacgacccgaaggcgtggacaccgagaccgagaccagc
gagggctccggaaccaagcgccccatccgggcgcagccggaggaccgtgcgaaggacaag
agccaggacaaacccgccgaggacaccgtggtcaagctgcgcggtcccgccaaggccgtg
gccgccaacatggacgcctccctgaccgtgcccaccgccaccacggtgcgcgcggtgccc
gccaagctgctgatcgacaaccgcctggtgatcaactcgcatttggcccgtaaccgcggt
ggcaaggtgtccttcacccacctcgtgggctacgccgtgattcgcgcgctcgccaacttc
ccgtcccagaacgtgatctacgatgaggtggacggcaagcccgccgcggtgcatcccgcg
cacgtgaacttcgggatcgcgatcgacatccccaacaaggacggttcccgcaacctggtg
gtgcccaacatcaagggtgcggaagagatgtccttccagcagttctggacctcgtacgag
gacatcgtcaagcgcgggcgcaatggcgcgctgaccatggaggactacgcgggcaccacg
gtgtccctgacgaaccccggtggcatcggcaccgtgcactcggtgccgcgactgtccaag
ggccaggcgtgcatcatcggcgtgggtgcgctggactaccccgccgagtacaagggtgcc
tccccccgcacgatcgcgcgcaacgcggtctccaaggtcatcaccctgacgtccacgtac
gaccaccgcgtgatccagggcgccggttcgggtgagttcctcaagctcgtggagcactac
ctgctgggcggcgaggacttctacgaccacatcttcgaggccctgcgcatcccctacgag
cccgtccgctgggccgtggacaaccaggtcaaccccgagatccagatcaataaggtcgcc
cggatccagcagctgatccactcctaccgcgtgcgcggtcacctcatggcggacaccaac
ccgctcgagtacgtgatgcgcaagcacccggacctggacatccgcacctacgggctcacc
ctgtgggacctggagcgcgagtggcccaccggcggtttcggcggccagagcctgctcacg
ctgcgcgtgatcctgggtcggctgcgggatgcctactgccgcaccgtgggcgtggagtac
atgcacatccaggagcccgagcagcgcgaatggttccagtccaagctcgagcgtgactac
cagaagcccgcgcgcgaggagcagttccacatcctcgagcggctcaacgccgccgaggcc
ttcgagaccttcctgcagaccaagtacgtgggtcagaagcgcttctcgctggagggcggc
gagtcgctgatcccgctgctggacgcgatcatctccgaggccgcggatgcttccctcgcg
ggtgtgggcatcgcgatggcccaccgcggccgcctcaacgtgctgaccaacattgccggg
aagtcctacgcccaggtgttccgcgagttcgagggcagccaggacccgcgcgccgccgag
ggctcgggtgacgtgaagtaccacctgggcaccgagggcgtgttcacctccgacaacggc
aacgagacccaggtgtacctggccgcgaacccctcccacctggaggccgcggacccggtg
atcgagggcatcgcccgcgccaagacggacgtgctgggcgccgggccggagggtaacggt
gagtaccccgtgctgcccatccaggtccacggtgacgccgcgatggccggacagggcatc
gtctacgaggtcatgcagatgtccgggctcgaggcctacaacgtgggtggcaccatccac
gtggtggtcaacaaccaggtgggcttcaccaccgcgccctctgcgggccgcacgtccacg
tactccacggacgttgcgcgtaccgtgcaggccccgatcttccacgtcaacgcggacgat
cccgaggccgtggcccgtgtggcgcagctcgcgttcgagtaccgccagcggttccagcgc
gacgtcgtgatcgacctggtgtgctaccgccgccgcgggcacaacgagggcgacgacccc
tcgatgacccagccgttgatgtactccctgatcgatggcaagcgctccacgcgcaaggtc
tacaccgagaacctcgtgggccgcggggacatcacgcaggaagaagcggaccgcgctctg
aaggactaccaggagcgcctggagcgggtcttcgccgagacccatgaggcccagacctcc
acggtcccgctcgtgaccggggacgccgccgcgatcgccaacatcgagcggccgtccgcg
cagcaggccgattccggggtgtccgtgcccaagaccaccgccatctccgaagaagcggcc
caccggatcggtgacgcctacgtggacctgcccgagggcttcacgatgcaccgcaagctg
cacaagctcgcggagaagcgccgcgagatgacgcgcgagggcgggatcgactggggcatg
ggcgagctcatggccttcggttcgctgctcatggacggtgtcccggtgcggatgtccggt
caggacgtgcgccgcggtacgttcacgcagcgccacgcggtgttcttcgacgccgagaac
ggtgccgaatggaccccgctgaaccacctctccgcggaccaggcacggttctcgatctac
aactccctgctctccgagtacggcgtgctgggcttcgagtacggctactccgtggaacgc
cccgaggcgctcacggtgtgggaggcccagttcggtgacttcaccaacggcgcgcagacc
atcgtggacgagttcatctcctccgcggaacagaagtggggtcagcgctccaacctggtg
atgttgttgccgcacggcttcgagggccagggacccgaccactcctccgcgcgcatcgag
cgcttcctggtgctgtgcgcggagaagaacatgatcgtggcccagccctccaccccggcc
aaccacttccacctgctgcgccgccaggcgtactcgcgcccgcgccggccgctgatcgtg
gccacgcccaagcagctgctgcgactgaaggccgcggcgtccccggtggaggagttcacg
cagggcggcttccagacggtcatcccggacaccgccgggctcgacgacgccaaggtcacc
gacgtcatcctggtctccggtcggttgtactacgacctcgtgacccagcagaagaagtcg
gacgaccactccaccgcgattgtgcgcgtggagcagctctacccgctgcccgtggacgag
atcaaggaacagctggcgcgctacccggaggcccggatcctgtgggctcaggacgaaccc
gccaaccagggtgcgtggccgttcatggccgtgaacctcgtgccgcagctggaccgcccg
gtcacgctcgcgtctcgccccgcctcggcctcccccgccaacggctcggccaagcgccac
acggcggagctggagaccctggtgcagcaggcgttcgcccgcggcgagtga
DBGET
integrated database retrieval system
