Kocuria sp. KD4: HBK84_08165
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Entry
HBK84_08165 CDS
T06521
Name
(GenBank) hypothetical protein
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
kod
Kocuria sp. KD4
Pathway
kod00550
Peptidoglycan biosynthesis
kod01100
Metabolic pathways
kod01502
Vancomycin resistance
kod02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HBK84_08165
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HBK84_08165
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HBK84_08165
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kod01002
]
HBK84_08165
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kod01011
]
HBK84_08165
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
kod01504
]
HBK84_08165
Enzymes [BR:
kod01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
HBK84_08165
Peptidases and inhibitors [BR:
kod01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
HBK84_08165
Peptidoglycan biosynthesis and degradation proteins [BR:
kod01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
HBK84_08165
Antimicrobial resistance genes [BR:
kod01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
HBK84_08165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
LGFP
VldE
DUF1244
Motif
Other DBs
NCBI-ProteinID:
QIR70020
LinkDB
All DBs
Position
complement(1819074..1820054)
Genome browser
AA seq
326 aa
AA seq
DB search
MRTVMRRPALLTALLAALLLVGGMAPAHAGAGIDNEYRALPNPGAWLGKPTSAERCGLRD
RGCYRQYQKGTIHWTSTTGARAQRGGILAKWRAEGSEHGALGYPVTRETCTGGTCEVRYQ
RGRITWTAQGGARVHRDIDDARSVSVVVNKKRPLSPRTYAPAPLRSVGGGVLLRDDAAAA
YQRMSRAAAAQGVTLVPVSGYRDYDTQARLYREYTALYGQATADTISARAGHSEHQTGLA
IDVGAPGATCGLLPCFGNTPQGKWIAANGHTYGFVVRYPNGHTATTGYAYEPWHLRYVGT
ATATSLKNSRSATVESYMGLPRAPKY
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccgtcatgcgtcgtccggccctgctcaccgccctgttggccgcgctgctgctc
gtgggcggcatggcaccggcccacgccggggcggggatcgacaacgagtaccgcgccctg
ccgaatcccggcgcatggttgggcaagcccacgtccgccgaacgctgtggcctgcgggac
cgcggctgctatcggcagtaccagaagggcacgatccactggacgtccacgaccggtgcg
cgggcccagcgcggcgggatcctggcgaagtggcgcgcggagggttccgagcacggggcc
ctggggtaccccgtgacgcgtgagacctgcacgggtggcacgtgcgaggtccgctaccag
cgcggccgcatcacctggaccgcccagggaggagcgcgggtgcaccgggacatcgacgat
gcccgcagcgtgtccgtggtcgtgaacaagaaacgcccgctgtccccgcgcacctacgcc
ccggctccgttacgttcggtgggcgggggagtcctgctacgggacgacgctgcagcggcc
taccagcgcatgagccgtgccgcggccgcacagggggtcacgctggtcccggtgagcggg
taccgcgactacgacacccaagcgcgcctctaccgcgagtacacggccctgtacggacag
gccaccgccgacaccatttccgcgcgggccggtcactccgaacatcagaccggcctcgcg
atcgacgtgggcgcccccggggccacctgcggtctgctcccgtgcttcggcaacacccca
caggggaagtggatcgccgcgaatgggcacacctacgggttcgtggtgcgctaccccaac
gggcacaccgcaaccaccgggtacgcctacgaaccgtggcacctgcgctacgtgggcacc
gccacggccacgagtttgaagaacagcaggtccgcgacggtggagtcctacatgggtctg
ccgcgggccccgaagtactga
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