Komagataeibacter oboediens: LV478_05305
Help
Entry
LV478_05305 CDS
T08952
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
koi
Komagataeibacter oboediens
Pathway
koi00909
Sesquiterpenoid and triterpenoid biosynthesis
koi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
koi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
LV478_05305 (shc)
Enzymes [BR:
koi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
LV478_05305 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
LV478_05305 (shc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Pec_lyase
Motif
Other DBs
NCBI-ProteinID:
WEQ52955
LinkDB
All DBs
Position
complement(624823..626856)
Genome browser
AA seq
677 aa
AA seq
DB search
MAKTPETTTTASRARKTTATPRRATRPRVAPDAPLDPADLDQAVTRAHAALGKRQADDGH
WVFDLEADATIPAEYVLLEHYLDRIDPALEQRIGIYLRRIQGAHGGWPLYQDGTFDLSAS
VKAYFALKAIGDSVHAPHMVRARQAILDHGGAERTNVFTRIQLALFGDVPWDAAPVMPVE
IMLLPRRALFSVWNMSYWSRTVIAPLLVLAALRPTAVNPRRVHVHELFVTPPGKVRDWIR
GPYRSVWGHVFRYADAVLRPAERLIPEKTRRRAIKAAVDFIEPRLNGLDGLGAIYPAMAN
TVMMFRALGISDDDPRAKAAWEAVQRLLVNQGKETYCQPCVSPIWDTGLAGHAMIEAASG
PGGIAPEETKRKLATAARWLRERQILNVRGDWSINRPDVRPGGWAFQYANDYYPDVDDTA
VVGMLLHRDGDPANADAIARAREWIIGMQGSNGGWGAFDVDNSRDVLNHIPFADHGALLD
PPTADVTARCISFLAQLRQVEDHGAIERGIAYLRREQEKDGSWFGRWGTNYIYGTWSVLC
ALNAAGMPHGDPMIIRAVDWLRRHQRADGGWGEGCESYEGGAHGDYKQSLPSQTAWAVLG
MMAVGLRDDPAVARGIAWLGRTQGRNGEWKEEPYNAVGFPRVFYLRYHGYRQFFPLLALA
RYRNMQLSNSGRVGYGF
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacacccgagacgacgaccacagcatcccgcgcccgcaagacgacagcaaca
ccccgccgggcgaccagaccccgtgtcgcaccggatgccccgctggacccggccgatctg
gaccaggcggtaacgcgcgcgcatgcggcactgggcaagcggcaggcggatgacggacac
tgggtctttgatctggaggccgatgccaccatcccggcggaatacgtgctgctggaacat
tatctggaccgcattgaccccgcgctggaacagcggatcgggatatacctgcgccggatc
cagggcgcgcatggcggctggccgctgtatcaggacggaacgttcgacctgtcggcgtcg
gtcaaggcgtattttgccctcaaggcgattggcgacagcgtgcatgcgccgcacatggtg
cgcgcacggcaggccatccttgaccatggcggggcggagcggaccaatgtgttcacccgt
atccagcttgccttgtttggtgacgtgccatgggacgcggcccccgtcatgccggtcgag
atcatgctgctgccgcgcagggcgctgttctcggtatggaacatgtcctactggtcgcgc
acggtgatcgcgccgctgctggtgctggcggcactccgccccactgcggtcaatccgcgc
cgggtgcatgtgcacgaactgttcgtgacgccgcccggaaaggtacgggactggattcgc
gggccataccgctccgtctgggggcatgtgttccgctatgcggatgcggtgctgcggcct
gctgaacgcctgatccccgaaaagacgcggcgcagggccataaaggcggcagtcgatttc
atcgagccacggctgaacggactggatgggcttggggccatttaccccgccatggccaat
acggtcatgatgttccgcgcgctgggcatatccgatgacgacccgcgcgcgaaagccgcg
tgggaggcggtgcagcgcctgctggtcaatcagggcaaggaaacgtactgccagccctgt
gtctcccccatctgggataccggtctggccggtcatgccatgatcgaggccgcatccggt
cccggcggcatcgcgccggaggagacgaaacgcaaactggcgactgccgcaaggtggctg
cgtgaacgccagatcctgaacgtcaggggggactggtccatcaaccgtcccgatgtccga
cccggtgggtgggcgttccagtatgccaatgactattaccccgatgtggacgacaccgcc
gttgtcggcatgctgctgcaccgcgacggtgatccggccaatgcggatgcgattgcccgc
gcgcgggaatggatcatcggcatgcagggcagcaatggcggctggggcgcattcgatgtt
gataacagccgcgacgtgctcaaccacattccctttgccgaccatggcgcactgcttgac
ccgcccacggcggacgtgacggcgcgctgcatttccttcctcgcgcagctgcgtcaggtc
gaggaccacggcgcgatcgaacgcggtatcgcctatctgcgcagggagcaggaaaaggac
ggatcgtggttcgggcgctggggtaccaattacatctatggcacgtggtccgtgctgtgc
gcgctcaatgccgccgggatgccgcatggcgatcccatgattatccgtgcggtcgactgg
cttcgtcgccaccagcgtgccgatggcggctggggcgaaggctgcgagagttatgaaggc
ggtgcgcatggcgactataagcagagcctgccctcacagaccgcatgggccgtactgggc
atgatggcggtcggcctgcgggatgacccggccgtggcgcggggtattgcctggctgggc
cgcacgcagggcaggaatggcgaatggaaggaagaaccctataacgccgtcggttttccc
agggtgttctacctgcgctaccatggttaccggcagttctttccgcttctggccctggcg
cggtaccggaacatgcagctgagcaactccggccgtgttggctatggtttctga
DBGET
integrated database retrieval system
