Kosakonia oryzendophytica: O9K67_20640
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Entry
O9K67_20640 CDS
T08786
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo00540
Lipopolysaccharide biosynthesis
koo01100
Metabolic pathways
Module
koo_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
O9K67_20640 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
koo01005
]
O9K67_20640 (lpxC)
Enzymes [BR:
koo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
O9K67_20640 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
koo01005
]
Lipid A
O9K67_20640 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
WBT57514
LinkDB
All DBs
Position
complement(4277202..4278119)
Genome browser
AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVVEVDAPEIPIMDGSAAPFVYLLLDAGI
EELNSAKKFVRIKNTVRVEDGDKWAEFKPHNGFSLDFTIDFNHPAIDASTQRYAMNFSAD
AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFEDEAELPLAFKAP
STVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacacttaaacgtatcgttcaggcgactggtgtcggtttgcatacc
ggcaagaaagtcaccctgacgttgcgccctgcgccggcaaataccggggtcatctatcgt
cgcactgacttgaatccaccggtagactttccggctgatgctaaatctgtgcgtgatact
atgctctgtacttgtctggtcaatgagcatgacgtgcggatttcgaccgtcgagcatctg
aatgctgctctggcggggctgggtatcgacaatattgttgttgaagtcgatgcgccggaa
attccgattatggatggcagtgctgcaccgttcgtctacttgctgctggatgcagggatc
gaagagctgaacagcgccaagaaatttgtgcgcatcaaaaacaccgtacgtgttgaagac
ggcgataaatgggctgagtttaaaccgcacaatggtttttctctcgattttaccatcgac
ttcaatcacccggcgattgatgcaagcacgcagcgctacgcgatgaacttctctgccgac
gcatttatgcgccagattagccgcgcgcgcaccttcggtttcatgcgcgatatcgaatac
ctccagtcccgtggattgtgcctgggcggtagcttcgattgtgccatcgtagttgacgat
tatcgcgtattgaacgaagacggtctgcgtttcgaagatgaatttgttcgccacaaaatg
ctggatgcaattggcgacctgttcatgtgtggtcacaacatcattggtgcgtttacggcg
tataaatccggtcatgcactgaacaacaaactgttgcaggctgttctggcaaaacaggaa
gcctgggaatatgtgactttcgaagacgaagcagaattgccgctggcgttcaaagccccg
tctacggttctggcataa
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