Kordia sp. SMS9: KORDIASMS9_03961
Help
Entry
KORDIASMS9_03961 CDS
T05562
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
kos
Kordia sp. SMS9
Pathway
kos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KORDIASMS9_03961 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kos03400
]
KORDIASMS9_03961 (nth)
Enzymes [BR:
kos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KORDIASMS9_03961 (nth)
DNA repair and recombination proteins [BR:
kos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KORDIASMS9_03961 (nth)
Prokaryotic type
KORDIASMS9_03961 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
TEA
Motif
Other DBs
NCBI-ProteinID:
AXG71704
UniProt:
A0A345H566
LinkDB
All DBs
Position
4524355..4525026
Genome browser
AA seq
223 aa
AA seq
DB search
MTKQEKVQFVIDTLEAYYPEIPVPLDHTDPYTLLIAVLMSAQSTDVRVNQITPLLFERAD
NPYDMIKLSVDEIREIIKPVGLSPMKAKGIYGLSHILIDKHDGNVPKTLEELEELPAVGH
KTASVVISQAFGIPAFPVDTHIHRLMYRWNLTNGKNVVQTERDAKRLFPREKWNDLHLQI
IWYGREYSPARGWDLDKDIITKTIGRKSVINEYIKLKTKKTRS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacaagaaaaggttcagtttgtaattgatactttagaagcatattatccagaa
attcctgtgccactcgatcacacagatccgtatactttattgattgccgtgttgatgtct
gcacaaagtaccgatgttcgcgtgaatcaaattacgccattattgtttgagcgcgctgac
aatccgtatgatatgatcaaactttcagtagacgaaattcgagaaattatcaaaccagta
ggcttatctcctatgaaagcaaaaggaatttacggtttgtcacatattttgattgataaa
cacgatggaaacgttcctaaaacattggaagaactggaagaattgcctgcggttggacat
aaaacggcaagtgttgtcatcagtcaagcttttggtattccagcatttccggtagataca
cacattcacagactcatgtatcgttggaatttgaccaatggaaaaaatgtggttcaaaca
gaaagagatgccaaacgtttgtttccaagagaaaagtggaacgatttgcatttacaaatt
atatggtacggaagggaatattcgccagcgcgcggttgggatttggacaaagatattatt
accaaaacgattggtagaaaatctgttattaacgaatatataaagctaaaaacaaaaaag
actcgcagctaa
DBGET
integrated database retrieval system
