KEGG   Klebsiella pneumoniae 30660/NJST258_1: KPNJ1_00119
Entry
KPNJ1_00119       CDS       T03176                                 
Name
(GenBank) NAD-dependent DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
kpa  Klebsiella pneumoniae 30660/NJST258_1
Pathway
kpa03030  DNA replication
kpa03410  Base excision repair
kpa03420  Nucleotide excision repair
kpa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kpa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KPNJ1_00119
   03410 Base excision repair
    KPNJ1_00119
   03420 Nucleotide excision repair
    KPNJ1_00119
   03430 Mismatch repair
    KPNJ1_00119
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kpa03032]
    KPNJ1_00119
   03400 DNA repair and recombination proteins [BR:kpa03400]
    KPNJ1_00119
Enzymes [BR:kpa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     KPNJ1_00119
DNA replication proteins [BR:kpa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     KPNJ1_00119
DNA repair and recombination proteins [BR:kpa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     KPNJ1_00119
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KPNJ1_00119
   MMR (mismatch excision repair)
    DNA ligase
     KPNJ1_00119
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      KPNJ1_00119
SSDB
Motif
Pfam: DNA_ligase_OB DNA_ligase_aden HHH RNA_ligase DUF3701 Nlig-Ia
Other DBs
NCBI-ProteinID: AHM82525
LinkDB
Position
119057..120754
AA seq 565 aa
MMEEGTAMRKGGWWLALGMFSASALATCPDWPPARGRQETSRLHQQIVAWKEAYWRQGAS
GVSDDVYDQLTLRLAQWRQCFPGATPEDDDLPPPTGDARHPVAHTGVRKLADEDSVARWM
KNKSDLWIQPKVDGVAVTLVYRQGRLVQAISRGDGLRGEAWTARARQIPALEKVMTGELA
DSVLQGELFLRRGGHVQQQAGGMNARAKVAGLMMRADAAAALSQLDVFIWAWPDGPSDMR
RRQQLLTQAGFKYSGQYTHPVSSIEQVAQWRQRWYRSPLPFVSDGVIVREGREPPGRVWS
PGKGEWLAAWKYPPASRVMQVRAIRFSTGRSGRLNVVAELEPQRLDDKRVQRVNVGSVSR
WQMLDIGVGDQLQISLAGQGIPRVDAVVWRTAERHKPTPPPAKFNALTCYFATPECSEQF
LSRLIWLSSKSALNVDGVGENLWRVIQQQNPMTHIFSWLALTVEQLQAVPGISAARGQHL
WHQFDLVRKRPFIRWVLAMGIPVPQGALAQLESENWHLLAAKSEAQWRTLPGVGEIRARQ
LVAFLHHPDVVALAQWLSGQRIPGF
NT seq 1698 nt   +upstreamnt  +downstreamnt
gtgatggaggaggggactgcaatgcgtaaaggagggtggtggctggcgttagggatgttc
tctgccagcgcgctggcgacgtgtccggactggccgccggccagaggaaggcaggagaca
tcacgccttcatcagcaaattgtcgcctggaaagaggcttactggcggcagggcgccagc
ggagtgagcgatgacgtttacgaccagctcaccctgcgcctggcgcagtggcgacaatgc
tttccgggcgcgacgcctgaggatgacgatctgcctccgcccaccggcgatgcgcgtcat
ccggtggcccataccggcgtgcgcaagctggcggatgaggacagcgttgcccgctggatg
aaaaataaatccgacctgtggatacagcctaaagtggacggcgtggcggtgactctcgtt
tatcgccaggggcgtctggttcaggccattagccgcggcgatggtctgcgcggtgaggca
tggaccgcccgagcccggcagatcccagcgctggagaaagtgatgaccggtgaactggcc
gacagcgtactgcagggggagctgtttctgcgccggggcggccatgttcagcagcaggct
ggggggatgaacgcgcgggcgaaagtcgccgggttgatgatgcgagccgacgcggcggcg
gcgctcagtcaactggacgtttttatctgggcctggccagacggcccgtcggatatgcgc
cgtcgacagcagctgctgacgcaggcggggtttaagtacagcgggcaatatacccacccg
gtgtcgagcatcgagcaggtggcgcagtggcgccagcgctggtatcgctcgccgctgccc
ttcgtcagcgacggtgtgattgtgcgcgaaggacgcgagccgccagggcgagtctggtcg
cccggaaagggcgagtggctggctgcctggaaatatcctccggcatcgcgggtgatgcag
gtacgggcgatccgtttcagtaccggccgcagcggcagactcaacgtggtggccgagctt
gagccccagcggctggatgataaacgcgtgcagcgggttaacgttggctctgtgtcccgc
tggcagatgctggatattggggttggcgatcagctgcagatcagtctggcagggcagggt
attcctcgggtcgacgccgtcgtctggcggacggccgagcgccataaaccgacgccgccg
ccggcgaaatttaatgcgctaacctgctatttcgccacccctgagtgcagcgaacagttt
ctttccaggctgatctggttgtcatcaaagtccgccctgaatgtcgatggcgtgggggaa
aatttatggcgcgtcattcagcagcaaaacccgatgacgcatatcttttcctggctggcg
cttaccgttgagcagctgcaggcggtgccagggatttccgccgcccgcgggcagcacctc
tggcatcagtttgatcttgttcgcaaacgaccttttatccgctgggtgctggcgatgggg
atcccggtgccgcagggggcgctggcgcagctcgaaagcgagaactggcatttgctggcg
gcaaaaagtgaagcgcaatggcgcacgctgccgggcgtgggggagatcagagcccgccag
ctggtggctttcctgcaccatccggacgtggtggcgctggcgcaatggcttagcgggcag
cgcatccccggattttaa

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