Klebsiella pneumoniae 30660/NJST258_1: KPNJ1_00119
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Entry
KPNJ1_00119 CDS
T03176
Name
(GenBank) NAD-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
kpa
Klebsiella pneumoniae 30660/NJST258_1
Pathway
kpa03030
DNA replication
kpa03410
Base excision repair
kpa03420
Nucleotide excision repair
kpa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KPNJ1_00119
03410 Base excision repair
KPNJ1_00119
03420 Nucleotide excision repair
KPNJ1_00119
03430 Mismatch repair
KPNJ1_00119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpa03032
]
KPNJ1_00119
03400 DNA repair and recombination proteins [BR:
kpa03400
]
KPNJ1_00119
Enzymes [BR:
kpa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
KPNJ1_00119
DNA replication proteins [BR:
kpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KPNJ1_00119
DNA repair and recombination proteins [BR:
kpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
KPNJ1_00119
NER (nucleotide excision repair)
GGR (global genome repair) factors
KPNJ1_00119
MMR (mismatch excision repair)
DNA ligase
KPNJ1_00119
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KPNJ1_00119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_OB
DNA_ligase_aden
HHH
RNA_ligase
DUF3701
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
AHM82525
LinkDB
All DBs
Position
119057..120754
Genome browser
AA seq
565 aa
AA seq
DB search
MMEEGTAMRKGGWWLALGMFSASALATCPDWPPARGRQETSRLHQQIVAWKEAYWRQGAS
GVSDDVYDQLTLRLAQWRQCFPGATPEDDDLPPPTGDARHPVAHTGVRKLADEDSVARWM
KNKSDLWIQPKVDGVAVTLVYRQGRLVQAISRGDGLRGEAWTARARQIPALEKVMTGELA
DSVLQGELFLRRGGHVQQQAGGMNARAKVAGLMMRADAAAALSQLDVFIWAWPDGPSDMR
RRQQLLTQAGFKYSGQYTHPVSSIEQVAQWRQRWYRSPLPFVSDGVIVREGREPPGRVWS
PGKGEWLAAWKYPPASRVMQVRAIRFSTGRSGRLNVVAELEPQRLDDKRVQRVNVGSVSR
WQMLDIGVGDQLQISLAGQGIPRVDAVVWRTAERHKPTPPPAKFNALTCYFATPECSEQF
LSRLIWLSSKSALNVDGVGENLWRVIQQQNPMTHIFSWLALTVEQLQAVPGISAARGQHL
WHQFDLVRKRPFIRWVLAMGIPVPQGALAQLESENWHLLAAKSEAQWRTLPGVGEIRARQ
LVAFLHHPDVVALAQWLSGQRIPGF
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgatggaggaggggactgcaatgcgtaaaggagggtggtggctggcgttagggatgttc
tctgccagcgcgctggcgacgtgtccggactggccgccggccagaggaaggcaggagaca
tcacgccttcatcagcaaattgtcgcctggaaagaggcttactggcggcagggcgccagc
ggagtgagcgatgacgtttacgaccagctcaccctgcgcctggcgcagtggcgacaatgc
tttccgggcgcgacgcctgaggatgacgatctgcctccgcccaccggcgatgcgcgtcat
ccggtggcccataccggcgtgcgcaagctggcggatgaggacagcgttgcccgctggatg
aaaaataaatccgacctgtggatacagcctaaagtggacggcgtggcggtgactctcgtt
tatcgccaggggcgtctggttcaggccattagccgcggcgatggtctgcgcggtgaggca
tggaccgcccgagcccggcagatcccagcgctggagaaagtgatgaccggtgaactggcc
gacagcgtactgcagggggagctgtttctgcgccggggcggccatgttcagcagcaggct
ggggggatgaacgcgcgggcgaaagtcgccgggttgatgatgcgagccgacgcggcggcg
gcgctcagtcaactggacgtttttatctgggcctggccagacggcccgtcggatatgcgc
cgtcgacagcagctgctgacgcaggcggggtttaagtacagcgggcaatatacccacccg
gtgtcgagcatcgagcaggtggcgcagtggcgccagcgctggtatcgctcgccgctgccc
ttcgtcagcgacggtgtgattgtgcgcgaaggacgcgagccgccagggcgagtctggtcg
cccggaaagggcgagtggctggctgcctggaaatatcctccggcatcgcgggtgatgcag
gtacgggcgatccgtttcagtaccggccgcagcggcagactcaacgtggtggccgagctt
gagccccagcggctggatgataaacgcgtgcagcgggttaacgttggctctgtgtcccgc
tggcagatgctggatattggggttggcgatcagctgcagatcagtctggcagggcagggt
attcctcgggtcgacgccgtcgtctggcggacggccgagcgccataaaccgacgccgccg
ccggcgaaatttaatgcgctaacctgctatttcgccacccctgagtgcagcgaacagttt
ctttccaggctgatctggttgtcatcaaagtccgccctgaatgtcgatggcgtgggggaa
aatttatggcgcgtcattcagcagcaaaacccgatgacgcatatcttttcctggctggcg
cttaccgttgagcagctgcaggcggtgccagggatttccgccgcccgcgggcagcacctc
tggcatcagtttgatcttgttcgcaaacgaccttttatccgctgggtgctggcgatgggg
atcccggtgccgcagggggcgctggcgcagctcgaaagcgagaactggcatttgctggcg
gcaaaaagtgaagcgcaatggcgcacgctgccgggcgtgggggagatcagagcccgccag
ctggtggctttcctgcaccatccggacgtggtggcgctggcgcaatggcttagcgggcag
cgcatccccggattttaa
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