Kwoniella pini: 30171792
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Entry
30171792 CDS
T10980
Symbol
I206_105675
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
kpin Kwoniella pini
Pathway
kpin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
30171792 (I206_105675)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpin03019
]
30171792 (I206_105675)
Messenger RNA biogenesis [BR:
kpin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
30171792 (I206_105675)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
RsgA_GTPase
Arf
nSTAND3
AAA_28
ORC-CDC6-like
AAA_23
FtsK_SpoIIIE
NACHT
AAA_27
PduV-EutP
MMR_HSR1
CLP1_P
AAA_15
AAA_33
SRP54
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
30171792
NCBI-ProteinID:
XP_019011325
UniProt:
A0AAJ8L9U4
A0A1B9I3K0
LinkDB
All DBs
Position
7:join(1424812..1424959,1425066..1425166,1425236..1425384,1425441..1425453,1425516..1425593,1425665..1425752,1425817..1426037,1426245..1426292)
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AA seq
281 aa
AA seq
DB search
MTIKQDNELLALDCQHLTYSWVEGDEPVLNDVNLDLKKGDRCLLLGANGAGKSTLLRILA
GKRLTKTRSCKILGQDVFMNPPGGVVYLGTEWSTNPVVRSDIVVSHFLDSVGGYRHKARR
DRLLQILDVDLDWHMHQISDGERRRVQLCMGLMAEWDVLLLDEVTVDLDVLVRADLIDFL
ISESETRGATIVYATHIFDGLRKFPTKICHMQLGSTPRGTMTWPPSNGPEPEQDLFNLAL
GWLREDRELRRVKEEAKGRIRGPKTDTRDAKTFFEKYDYSH
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgactatcaaacaagacaacgaacttctagctttggattgtcagcatttgacttattct
tgggttgaaggagatgaacctgttttaaatgatgtcaatttggatttgaagaaaggcgat
aggtgtttattattaggtgctaatggagctggaaaatcaacattacttcgaattttagct
ggaaaaagattaactaaaactagaagttgtaaaatcttaggacaagatgtatttatgaac
cctcctggcggcgtagtttatctgggcacagaatggtctactaatcctgtagttcgttcc
gatattgtcgtttcccacttcttggatagtgtaggtggatatagacataaagctagacga
gatagattgttacagattttagacgttgatttggattggcatatgcatcagatttccgat
ggtgaaagaagaagagtacaattgtgtatgggtttgatggctgaatgggacgttttgtta
ttagatgaggtcactgtcgatctggacgttcttgtccgagcggatctcattgatttctta
atttcggaatcggaaactagaggagctacgattgtttatgcgacacacatctttgacggt
ttacgcaaattccccactaagatatgccacatgcaattgggttcgactcctcgaggaacc
atgacctggccaccttctaacggcccggagcccgaacaagacttgtttaatcttgctctt
gggtggttgagagaagatagagaattgagacgagtcaaggaggaagcgaaaggtagaatt
agaggaccaaagactgatacaagagacgctaaaacatttttcgagaaatatgattattct
cattaa
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