Klebsiella quasivariicola: B8P98_07920 Help Entry B8P98_07920       CDS       T05116                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism kqv  Klebsiella quasivariicola Pathway kqv03030   DNA replication kqv03410   Base excision repair kqv03420   Nucleotide excision repair kqv03430   Mismatch repair Brite KEGG Orthology (KO) [BR:kqv00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     B8P98_07920    03410 Base excision repair     B8P98_07920    03420 Nucleotide excision repair     B8P98_07920    03430 Mismatch repair     B8P98_07920  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:kqv03032]     B8P98_07920    03400 DNA repair and recombination proteins [BR:kqv03400]     B8P98_07920 Enzymes [BR:kqv01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      B8P98_07920 DNA replication proteins [BR:kqv03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      B8P98_07920 DNA repair and recombination proteins [BR:kqv03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      B8P98_07920    NER (nucleotide excision repair)     GGR (global genome repair) factors      B8P98_07920    MMR (mismatch excision repair)     DNA ligase      B8P98_07920   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       B8P98_07920 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 Nlig-Ia DNA_ligase_ZBD PTCB-BRCT HHH Prok-E2_C DZR_2 Motif Other DBs NCBI-ProteinID:  ASV19225 UniProt:  A0A223U8D3 LinkDB All DBs Position 1548129..1550144 Genome browser AA seq 671 aa AA seqDB search MEPIEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELESQHPELITPDSPTQ RVGAAPLTAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSTDGLTYCCELKLDGLA VSILYENGVLMQAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG FEKINEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPASHS ARLLQFKAWGLPVSDRVTLCHTPEEVLTYYRKVEEDRPHLGFDIDGVVIKVDSLALQEQL GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN ADEIERLGLKIGDKVVIRRAGDVIPQVVNVVLSERPADARDVVFPTHCPVCQSDVERVEG EAVARCTGGLICGAQRKESLKHFVSRRALDVDGMGDKIIDQLVEKEYVHTPADLFRLTAG KLTGLDRMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAHFGTLDALEQ ASIEDLQKVPDVGIVVATHTFNFFAEESNRDVIAQLLAEGIHWPAPVVVKAEEIDSPFAG KTVVLTGSLSQLSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI DEAEMMRLLGE NT seq 2016 nt NT seq  +upstreamnt  +downstreamnt atggaaccgatcgaacaacaactgactgaactgcgaaccacgcttcgccatcatgaatat ctgtaccacgttatggacgcaccggaagtacccgatgcggaatatgaccgcctgatgcgc gagctgcgcgagctggagagtcagcatccggagctgattaccccggactcgccgacgcag cgggtgggggcggcgccactgaccgccttcagccagatccgccatgaagtaccgatgctg tcgctggacaacgtatttgatgaagagagttttcttgccttcaacaagcgggtgcaggat cgtctgaaaagtactgacggtctcacctactgctgcgagcttaagctcgacggcctcgcg gtgagtattctctatgaaaacggcgtgttaatgcaggcggcgacccgcggcgatggcacc accggcgaagatattacctctaacgtgcgaaccattcgcgccatcccgctcaagctgcat ggcgaaaatatccccgcccgccttgaggtgcgcggtgaggtgttccttccgcaggccggg tttgaaaaaatcaatgaagaagcgcgccgcaccggcggaaaagtgtttgctaacccgcgt aatgcggcggcgggttcgctgcgccagctcgatccacgcatcacagcgaagcgaccgctt actttcttctgctatggcgtgggcgtgctggagggcggcgagctgcccgccagccactcg gcccgtttgctgcagtttaaagcctgggggctgccggtgagcgatcgcgtcaccctgtgc catacccccgaggaagtgctcacttactatcgtaaagttgaggaagatcgtcctcatctg ggctttgacattgatggcgtagtgatcaaagtcgattcgctggcattgcaggaacagctg ggtttcgtggcccgcgcgccgcgctgggctgtggcctttaagttcccggcacaggagcag atgactttcgtccgggacgtggagttccaggtggggcgcaccggagcgattaccccagtg gcgcgcctggagccggtccatgttgccggcgtgctggtgagcaatgccaccctgcataac gccgatgaaatcgagcgcttaggtttgaaaatcggcgacaaggtggtgattcgccgggct ggcgacgtgatcccgcaggtggtcaacgtggtgctttccgagcgtccggcagatgcccgg gatgtggtcttcccgacccactgcccggtatgtcagtcagacgttgagcgggtcgagggc gaagcggtggctcgctgtacgggcggccttatctgcggtgcgcagcgcaaagagtcgctc aagcactttgtctctcgtcgcgcactggacgttgacggcatgggcgacaaaatcatcgat cagctggtagagaaagagtatgtccataccccggcggatctgttccgcctgacggcagga aaactgaccgggctggatcggatggggccgaagtctgcgcaaaacgtggtgaacgccctg gagaaagccaaagagacaacctttgcgcgcttcctttacgcgttgggtattcgcgaggta ggcgaagcgacggcggcggggctggcggcgcattttggcacccttgacgctctggagcag gcgtccattgaggatctgcaaaaggtccctgacgttggcatcgtagtcgccacccatacc ttcaacttctttgccgaagaaagcaaccgcgatgtcatcgcgcagctgctggccgaaggc atccactggccggcgcccgtggtggtgaaggcggaagaaattgatagtccgtttgcgggt aaaaccgtggttctgaccggtagcctgagtcagctgtcgcgggatgatgccaaagcacgt ctggtggcgctgggggcgaaggtagctggcagcgtgtcgaagaaaaccgatctggtgatt gccggcgaagcggcgggctctaagctggcgaaagcgcaggagctgggcattgaggtgatt gacgaagccgaaatgatgcgtctgctgggagaataa

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