Kosakonia radicincitans: A3780_06675
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Entry
A3780_06675 CDS
T04579
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00020
Citrate cycle (TCA cycle)
krd00785
Lipoic acid metabolism
krd01100
Metabolic pathways
krd01110
Biosynthesis of secondary metabolites
krd01120
Microbial metabolism in diverse environments
krd01200
Carbon metabolism
krd01210
2-Oxocarboxylic acid metabolism
Module
krd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
krd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A3780_06675
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
A3780_06675
Enzymes [BR:
krd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
A3780_06675
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
APG17251
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All DBs
Position
1452672..1455494
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AA seq
940 aa
AA seq
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MQNGAMKAWLDSSYLSGSNQSWIEQLYEDFLTDPDSVDANWRSMFQQLPGTGVKPDQFHS
KTRDYFRQLAKDASRYSSSISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQERV
ADLDPAFHDLSEADYQNSYNVGSFAIGKDTLPLGELIKALKETYCGSIGAEYMHITSTEE
KRWIQQRIESAAGKSSFSSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPL
LKEMIRHAGKSGTREVVLGMAHRGRLNVLVNVLGKQPQDLFDEFAGKHKEHLGTGDVKYH
MGFSSDVETEGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLSEPSSNKVLPITIHGDA
AVAGQGVVQETLNMSKARGYEVGGTVRVVINNQVGFTTSNPLDARSTPYCTDIGKMVQAP
IFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIK
KHPTPRKIYADRLEQDKTITLEDATEMVNLYRDALDAGECVVAEWRPMNMHSFTWSPYLN
HEWDESYPNKVEMKRLQELARRISTVPEAIEMQPRVAKIYADRQLMANGEKLFDWGGAET
LAYATLVDEGIPVRLSGEDTGRGTFFHRHAVIHNQANGSTYTPLSHVHNGQGPFRVWDSV
LSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSP
KSLLRHPQAVSTLDELANGTFMPAIGEVDDLDPQAVKRVILCSGKVYYDLLEQRRKNDQK
DVAIVRIEQLYPFPHQSVQDALKPYAHVHDFVWCQEEPLNQGAWYCSQHHFRDVIPFGAA
LRYAGRPASASPAVGYLSVHQKQQQELVNDALNVDSIKDK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacggcgcaatgaaagcctggctggactcttcttacctctctgggtcgaaccag
agctggatagaacagctctatgaagacttcttaaccgatcctgactcggtagatgctaac
tggcgatctatgttccagcagttaccgggcaccggagtcaaaccggatcagttccactcc
aaaacacgtgattatttccgtcaactggcgaaagatgcctcacgttactcttcctctatt
tccgaccccgacaccaacgttaagcaggttaaagtcctgcagttgatcaacgcctaccgc
ttccgtggtcaccagcatgcgaatctcgatccgttggggctgtggcagcaagagcgcgtt
gccgatctggatccggcattccacgatctgagcgaagcggattaccagaacagctataac
gtaggttcctttgcgattgggaaagataccctgccgctgggcgaattgatcaaagcgctg
aaagagacctattgcggttcgatcggcgcggaatacatgcacattaccagcactgaagag
aagcgctggatccagcagcggattgagtcagcagccggaaaatcgagcttcagcagcgaa
gagaaaaaacgcttcttaagcgaactgacggcagctgaaggtctggagcgttatctcggg
gcgaagttcccgggcgcgaaacgcttctcgctggaaggcggtgatgcgctgataccgctg
ctgaaagagatgattcgccatgcaggcaaaagcggcacccgcgaagtggtgctgggcatg
gcgcaccgcggtcgtctgaacgtgctggtcaacgtgctgggcaaacagccgcaggatctg
ttcgacgagtttgccggtaaacataaagaacacctcggtaccggcgacgtgaaataccat
atgggcttctcgtctgacgttgagactgaaggcggtctggtgcatctggcgctggcgttt
aacccgtcgcacctggaaatcgttagcccggtggtgattggttccgtacgcgcgcgtctt
gatcgcctctctgagccgagcagcaataaagtgctgccgatcaccattcacggtgacgcg
gcggtggcgggtcagggcgtggtacaggaaaccctgaacatgtccaaagcgcgcggttat
gaagtgggcggtacggtgcgcgtggtgatcaacaaccaggttggtttcaccacctccaac
ccgctggatgcccgctctacgccgtactgtaccgatatcggtaagatggtgcaggcgccg
attttccacgtcaacgcggacgatccggaagcggttgctttcgttacccgtctggcgctg
gacttccgtaacactttcaaacgcgatgtgtttatcgatctggtgtgctaccgccgtcac
ggccataacgaagccgacgagccgagcgcaacccagccgttgatgtaccagaaaatcaaa
aaacacccgacgccgcgtaaaatctacgccgatcgtctggagcaggacaaaaccatcacg
ctggaagatgccactgagatggttaacctgtaccgcgacgcgctggatgcgggcgagtgt
gtggtcgctgaatggcgtccaatgaatatgcactcctttacctggtcgccgtacctcaat
cacgagtgggatgagagttacccgaacaaagtagagatgaaacgcctgcaagaactggcg
aggcgcatcagcacggtgccggaagccattgagatgcagccccgtgtggcgaaaatctac
gccgatcgccagttaatggccaatggcgagaaactgttcgactggggcggtgctgaaacg
ctggcttacgccacgctggttgatgaaggcattccggtgcgcctctccggtgaagacacc
gggcgcggtaccttcttccatcgccacgccgtgatccataaccaggccaacggctcaacc
tatacgccgctaagccacgtgcataatggccagggcccgttccgcgtgtgggactccgtg
ctctctgaagaagcggtgctggcttttgaatatggctacgccaccgctgagccgcgtacc
ctgaccatctgggaagcacagttcggcgacttcgctaacggcgcgcaggtggtgattgac
cagttcatcagctccggcgaacagaagtggggccgtatgtgcgggctggtaatgctgttg
ccgcatggctatgaagggcagggcccggagcactcctccgcccgtctggagcgttatctg
caactgtgcgctgagcaaaacatgcaggtttgcgtcccgtccaccccggcgcaggtttac
catatgctgcgtcgtcaggcgttgcgcggtatgcgtcgcccgctggtggtgatgtcaccg
aagtcgctgctgcgtcatccgcaggcggtctccacgctggatgaactggcgaatggcacc
tttatgccggcgattggcgaagtggatgatttggatccgcaagccgtgaagcgcgttatc
ctttgttctggtaaggtttattacgacctgcttgaacagcgtcgtaaaaatgaccagaag
gatgtcgccattgtccgtattgagcagttgtacccgttcccgcatcagtcggtgcaggac
gcgttgaaaccttatgcgcacgtacatgattttgtctggtgccaggaagagccgcttaac
cagggcgcatggtactgcagccagcatcatttccgtgatgtgataccttttggggccgct
ctgcgctatgcaggacgcccggcctccgcctccccggcggtgggatatctgtccgttcac
cagaagcaacagcaagagctggtgaatgacgcgctgaacgtcgattcaataaaggataaa
taa
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