Kocuria rhizophila: KRH_04570
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Entry
KRH_04570 CDS
T00701
Symbol
nth
Name
(GenBank) putative endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
krh
Kocuria rhizophila
Pathway
krh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KRH_04570 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_04570 (nth)
Enzymes [BR:
krh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KRH_04570 (nth)
DNA repair and recombination proteins [BR:
krh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KRH_04570 (nth)
Prokaryotic type
KRH_04570 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BAG28804
UniProt:
B2GH52
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All DBs
Position
499891..500727
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AA seq
278 aa
AA seq
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MRFVPARQAEQAAARRRRAGSETALSRTRRARRIQRILAQTYPYAVAELDFDDAWQLLVA
TVLSAQTTDIRVNAVTPGLFAAYPGPRELAEAPAEDVQEMVRSLGFYRSKARSIQALAAR
VVDEYDGTVPGTLAQLVTLPGVGRKTANVVLGNAFGVPGITVDTHFGRLARRLGWTVQDD
PVKVEADVAALFPPALWTELSHELIYHGRRICHSRRPACGVCPVADLCPSYGEGPTDPEA
ARQLLGYELKPGREDLLAGFMAGRTRRQLRAEGHTLSA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcttcgtcccggcgcggcaggcggagcaggcggccgcgcggcgtcgtcgtgccggg
agtgagactgccttgtccaggacgcggcgcgcgcggcgcatccagcggatcctcgcgcag
acgtacccctacgccgtggcggagctggacttcgacgacgcctggcagctgctcgtggcc
acggtcctgtccgcacagaccaccgacatccgcgtcaacgcggtcaccccggggctgttc
gcggcgtaccccggcccgcgcgagctggccgaggcgcccgccgaggacgtccaggagatg
gtgcgctccctcggcttctaccgttccaaggcgcgctcgatccaggccctggccgcgcgc
gtcgtggacgagtacgacggcaccgtgcccggcacgctcgcgcagctcgtgaccctgccc
ggcgtggggcgcaagaccgcgaacgtggtgctcggcaacgcgttcggggtgcccgggatc
accgtggacacccacttcgggcggctcgcgcgcaggctggggtggaccgtccaggacgat
ccggtgaaggtcgaggcggacgtggcggcgctgttcccgcccgcgctgtggactgagctg
tcccacgagctgatctaccacggacggcggatctgccactcccgccggcccgcgtgcggg
gtgtgcccggtggcagacctgtgcccctcctacggcgagggccccacggacccggaggcg
gcgcgccagctactcggctacgaactgaaacccggccgcgaggacctgctggccgggttc
atggcgggacgcacccggcggcagctgcgcgccgagggacacacgctcagcgcgtga
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