Kineothrix sedimenti: V6984_20470
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Entry
V6984_20470 CDS
T10997
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ksi Kineothrix sedimenti
Pathway
ksi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ksi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6984_20470 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksi03400
]
V6984_20470 (nth)
Enzymes [BR:
ksi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V6984_20470 (nth)
DNA repair and recombination proteins [BR:
ksi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V6984_20470 (nth)
Prokaryotic type
V6984_20470 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
HHH_5
EndIII_4Fe-2S
HHH_8
DUF2400
Motif
Other DBs
NCBI-ProteinID:
XAH73851
LinkDB
All DBs
Position
complement(4323660..4324319)
Genome browser
AA seq
219 aa
AA seq
DB search
MTKKTKEIIDLLDERYGTEYRCFLNHENAWQLLIATILSAQCTDARVNVVTRDLFRKYPG
VEAFAKAELSELEKDIHSTGFYRNKAKNIIACCKELMARFDGEVPRSLEDLTSLAGVGRK
TANVIRGNIYNEPSIVVDTHVKRISKKLGLTKEEDPLKVELDLMKALPKEHWILWNIQII
TLGREICKAPTPKCEECFLQEQCDDYRKRNKDRKKKNDK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagacaaaggagatcatagatctgctggacgaaagatacggtacggaatac
cggtgcttcctgaatcatgaaaatgcgtggcagcttctgatcgcaacgattttaagcgct
cagtgcacggatgccagagtgaatgtggtaacccgggatttattccgcaaataccccggt
gtggaagcttttgcgaaggcggagctttctgagctggaaaaagatattcattccaccgga
ttctaccgcaataaggccaagaatattattgcctgctgcaaggagctgatggcaaggttt
gacggagaagtaccccgctcgctggaggatctcacttctcttgcgggagtagggagaaag
acggcgaacgttatcagaggaaatatttacaacgagccgagcatcgtggttgatacccat
gtaaagcggatttccaaaaagctgggactgacaaaggaagaggatccgttaaaggtagaa
ctggatttgatgaaggctctgccaaaagagcattggattctctggaacattcagattatt
accttgggacgggaaatatgcaaggcgcccacaccaaaatgtgaggagtgttttttgcag
gagcaatgtgacgattaccggaaacggaataaggataggaaaaagaagaatgataaatga
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