KEGG   Kwoniella shandongensis: 43586040
Entry
43586040          CDS       T11156                                 
Symbol
CI109_107008
Name
(RefSeq) uncharacterized protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
ksn  Kwoniella shandongensis
Pathway
ksn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ksn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    43586040 (CI109_107008)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ksn03400]
    43586040 (CI109_107008)
Enzymes [BR:ksn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     43586040 (CI109_107008)
DNA repair and recombination proteins [BR:ksn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     43586040 (CI109_107008)
SSDB
Other DBs
NCBI-GeneID: 43586040
NCBI-ProteinID: XP_031863489
UniProt: A0A5M6C6V2
LinkDB
Position
13:complement(join(869974..869990,870046..870122,870238..870375,870479..870573,870631..870681,870740..870835,870906..871272,871328..871430,871486..871614,871671..871755,871820..871853,871909..871966,872017..872029,872089..872210,872266..872309,872357..872381,872442..872530,872585..872644,872710..872831,872885..872990,873045..873243,873302..873337,873387..873472,873526..873604,873661..873868,873932..874068,874144..874229,874340..874476,874632..874766,874845..875153))
AA seq 1080 aa
MPSHWHRHPPPPSSQPPASDPTTSQLPASQPEPPTLPPSTLDRPAECINRQSTPHFSLLC
TMMDRLRTEETSKRRDILGRFMELWRVKVGWDMYPLIRLLLPDRDRERPVYNLKEAMLAK
CYIEVLGLDKHSEAAQRMIKWKQPVDGQAESHSGDFARVCYHEIAARSTVEEGQLSIEAV
NALLDQLATGRLKQNDYVPILRKINQQCTAAEQEWIIRIILKDLRISIREKGVFACFHPD
AADLFNVCSDLKRVCWTLYKPDIRLEKHQTNIELFRSFLPQLCYRSPSSSHEAIAKLVGG
PNTEFIMEEKLDGERMQLHIRGNGAQWFYCSRKAKDYTYLYGAHIGEGSLTQHIAGAFTD
KVKNIILDGEMLVWDPVVDKYLAFGTLKTAASDRVNDENAPRPCFKIFDILYVNDVCLTG
RRLRERKRLLKTGPIFNDLEQYKGRLEFAEERTGKTGKDIRDMLEQILETKGEGLVVKRS
DCIYQTNSRGADWIKVKPEYSDQMGENLDLLVLGGWWGKGGRTGKISSLLCGLRVQQDDD
GSGRIPEFTTFASVGSGMSYEDYEWILNKHKNHWKTFDRANPPKWLTTGPSGVDDKPDVY
IEPENSFVVEVKASEIVPAVGGYGAGYTLRFPRCRYIYWDKSSREHPTGDDSQDRDMWNC
LSVDEFQALLNKPKKRYADAEGGSFRKRRKVVPKKKVQLMTTIRGQRLSDEQVESNIFGG
LTFYIPKGSSSHSKADLEALVHKHGGNFTQAQLADLSALVISPDLKSPLVRAQKNKGVSV
IKPEWIYESIERRRPLPLIKDLLVFASDEAQDDRYFNKTLEEIDGISLVRDRTGHEGDDE
EEEEEEGDEYENGDRNGNDRSGADEPDDGHELNKTQHQKEMEAEWGLHRSPGVAASASTS
RAGSVKEESDTDSESGRRAIVSKEEDEANDSHESEPEANDEDLRLLPVRGVDVAEEDGMG
EDPDAMEYDKDKTFYHLVFYLDTPENAEKNGLEESSPPAEAIDRLAEADTLIRENGGRIV
TDIRDKKLTHIIMDDYDSGRYAELVRKTAKPKRKHIVLPSWVTECVEEDTLMNEDAHKPK
NT seq 3243 nt   +upstreamnt  +downstreamnt
atgccatcccactggcatcggcatcctcctcctccatcttcccaacctcctgcatcagac
cccacaacttcgcaactcccagcttcgcagcccgaaccacccacacttccaccctccacc
cttgaccgtcctgcagaatgtataaaccgacagtcaacacctcatttctcgttgttgtgt
acgatgatggatagattacggactgaagagacgagtaagagaagagatatattggggaga
tttatggagttgtggagggtgaaagttgggtgggatatgtatcctctaatcaggttgtta
ttgcctgatagagatcgtgaacgaccggtgtacaatttgaaagaagcaatgttagcgaaa
tgctatatcgaagtgctaggtctggacaagcatagtgaagcagcgcagaggatgatcaag
tggaaacagcccgttgatggacaggctgaatcacattcaggagacttcgctcgggtgtgc
tatcacgagatagcagcaagatctacagtagaagaaggacaactctccatcgaagcggtc
aacgcgttgttggatcagctcgctacaggtcgattgaagcaaaacgactatgtccctatt
ctcagaaagatcaaccaacaatgtacggctgctgagcaagagtggatcattcgtatcatt
ctgaaagacttacgaatatccattcgagagaaaggagttttcgcatgcttccatccagat
gctgcggatctcttcaacgtctgctctgatctcaaaagggtgtgctggacactgtacaag
cctgatatacgattggagaaacatcaaaccaacatcgagctcttccgctccttcctaccc
caattatgctacagatccccttcatcgtcgcacgaggcaatagccaaacttgttggcggt
ccgaacaccgagttcatcatggaagagaagcttgatggagagagaatgcaattacatatc
cgaggcaatggagctcaatggttttactgttccagaaaggcgaaagactatacgtactta
tatggagcgcatattggagaaggcagcttgacacaacatattgctggagctttcactgac
aaagtcaaaaatatcatcctcgatggagaaatgctggtgtgggacccggttgtggacaag
taccttgcctttggcacactcaagactgctgcttcagatcgcgtgaatgacgaaaatgcg
cctcggccatgcttcaagatcttcgatatcctatatgtgaatgacgtctgcctgaccgga
agacgtttgcgagaacgaaagcgactcttgaagactggacctatcttcaacgaccttgag
caatacaagggacgtttggagtttgcagaggaaagaacggggaagacagggaaagatatt
cgagatatgctggagcagattctggaaacgaagggagaaggattagtggtgaagcggagc
gattgtatctatcagactaattcgcgaggagcagattggatcaaggtcaaaccagaatac
tcagatcagatgggagagaacctcgacctgctagtacttggaggatggtggggtaaaggc
gggagaacagggaagatctcaagtctgctttgcggattgcgagtgcagcaagacgatgac
ggatcgggcaggataccggaattcacgacctttgcatcagtcgggtcgggtatgagctac
gaggactatgagtggatcttgaataaacacaagaaccactggaagactttcgatcgtgcc
aatccgcccaagtggcttactaccggaccaagcggagtagacgataaacctgacgtctac
attgagcctgaaaactctttcgtagtcgaagtgaaagcttctgagattgtaccggctgtt
ggcggatacggtgcaggctataccttgcgattcccccgctgtaggtatatctactgggac
aagagtagcagagagcatcccaccggagatgatagtcaagacagggacatgtggaattgc
ttgagtgttgatgagttccaggctttgctcaacaaaccgaagaagcggtatgcggatgct
gagggcggctctttccgtaaaaggcggaaggttgtgcctaagaagaaagtacaacttatg
accaccatccgaggtcaaaggctttcggacgaacaagtggaaagcaacatctttggcggc
ttgaccttctatataccaaagggtagttcgtcacactcgaaagccgacctggaagcattg
gtgcacaagcacggcggaaacttcacccaagcgcaactggcagacttgtcggcgctagtt
atatctccagatctaaaaagtccattggttcgagcccagaagaataagggtgtaagcgtg
attaagcccgaatggatctatgagagtatcgaaaggagaagacctctacctctgattaag
gaccttcttgtatttgcatccgatgaagcgcaagatgatcgatatttcaacaagactttg
gaagagatcgatggtatttcgttggtcagagatcgaactgggcatgagggcgacgacgaa
gaggaagaggaagaagaaggagatgaatacgaaaacggagatcgtaatggcaatgacagg
tcaggcgctgacgagccggatgacggtcacgaactcaacaagacgcaacatcagaaggag
atggaggcggaatggggtctgcatcgatcccctggcgttgctgcgtcggcgtcgacatct
cgagcaggatcagtgaaagaggaaagtgacactgattcagaatcggggagaagagctata
gtgtccaaggaggaagatgaggctaatgacagccacgagtcggagccggaagcaaatgat
gaagatcttagacttctccctgtacgaggggtagatgtggcagaggaggacggcatggga
gaggacccagatgcgatggagtacgacaaggataaaactttctaccatctcgtattctac
ttggatacacctgagaacgccgaaaagaacggattggaagagtcttctcctcctgcagaa
gccatcgaccggcttgcggaggcagacactctaatacgcgagaatggcggacgtatcgtc
actgatatcagagataagaaattgacacatatcataatggatgattacgattcggggaga
tatgcggagttggtgaggaagacagcaaaaccaaagagaaagcacatcgtcttgccgagc
tgggtaacggagtgtgtcgaggaagacacgctgatgaatgaggatgcgcataagccgaag
tag

DBGET integrated database retrieval system