Kosakonia styphnolobii: Q5705_08165
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Entry
Q5705_08165 CDS
T11811
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
ksy Kosakonia styphnolobii
Brite
KEGG Orthology (KO) [BR:
ksy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ksy03009
]
Q5705_08165 (rlmC)
Enzymes [BR:
ksy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
Q5705_08165 (rlmC)
Ribosome biogenesis [BR:
ksy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Q5705_08165 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
Cons_hypoth95
Methyltransf_ANTKMT
Methyltransf_4
Methyltransf_12
Methyltransf_37
Methyltransf_11
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
WLI78499
LinkDB
All DBs
Position
1711891..1713018
Genome browser
AA seq
375 aa
AA seq
DB search
MQCALFDAGRCRSCQWIEQPVSTQLSAKMDDLHGLLAALPVEAWCAPVSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLTSCPLYPDAFAPVFAALKPFIARAGLTPYNVARKRG
ELKYLLLTESQQDGGMMLRFVLRSETKLEQLRAALPWLQAQLPQLKVISVNIQPVHMAIM
EGETEIFLTEQQALAERFNGVPLWIRPQSFFQTNPAVASQLYATARDWVRALPVNHMWDL
FCGVGGFGLHCATPEMRLTGIEIAPEAIACATQSAQALGLNNLHFQALDSTRFATAQGDV
PDLVLVNPPRRGIGRELCEYLSRMAPPFIIYSSCNAATMANDLALLPGYRIARVQLFDMF
PHTAHYEVLTLLIRR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgctctctttgatgccggtcgctgtcgttcctgtcaatggatcgaacaaccg
gtatccacacaactttccgccaaaatggacgatcttcatggcttgctggcggcattaccg
gttgaagcgtggtgcgcacccgtcagcggcccggagcaggggtttcgcaataaagccaaa
atggtggtcagcggcagcgtcgaaaaaccgctgctggggatgctgcatcgcgacgggacg
ccagaagatctcaccagttgccccctttaccccgacgcgtttgccccggttttcgccgcg
ctaaaaccctttatcgcccgcgcgggcttaacgccgtataacgtggcgcgcaaacgcggc
gaactgaaatacctgctgttaaccgaaagtcagcaagatggcggcatgatgctgcgtttt
gtgctgcgttcagagacgaagctggaacagttacgtgcggccctgccgtggttgcaggca
cagctaccgcaactgaaggttatttcggtaaatattcagccagtgcatatggccattatg
gaaggggagacggagatctttctgactgaacaacaagcgctggcggaacgtttcaacggc
gtgccgctgtggatccgcccgcaaagcttcttccagactaacccggctgttgccagccag
ctttatgccaccgcgcgcgactgggtgcgggcgctgccggtaaaccatatgtgggatctc
ttttgcggcgtcggcggttttggcctgcactgcgcaacgcccgaaatgcggctcaccggc
attgaaatcgcgccggaagccattgcctgcgcaacgcaatcggcgcaggcgctgggcctg
aataatctgcatttccaggcgctggattccacccgttttgccacggcgcaaggcgatgtg
ccggatctggtgttggtgaacccgccccggcgcggtatcgggcgcgagctgtgtgaatac
ctgagccgcatggcgccgccctttatcatctactcaagttgtaatgccgcaacgatggcg
aacgatctcgcgttgttgccggggtatcgcattgctcgggtgcaactctttgatatgttt
ccccatactgcgcattatgaagtgctgacgctgcttatcaggcgttaa
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