Kutzneria sp. CA-103260: JJ691_91610 Help Entry JJ691_91610       CDS       T08943                                  Symbol ligA_2 Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism kut  Kutzneria sp. CA-103260 Pathway kut03030   DNA replication kut03410   Base excision repair kut03420   Nucleotide excision repair kut03430   Mismatch repair Brite KEGG Orthology (KO) [BR:kut00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     JJ691_91610 (ligA_2)    03410 Base excision repair     JJ691_91610 (ligA_2)    03420 Nucleotide excision repair     JJ691_91610 (ligA_2)    03430 Mismatch repair     JJ691_91610 (ligA_2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:kut03032]     JJ691_91610 (ligA_2)    03400 DNA repair and recombination proteins [BR:kut03400]     JJ691_91610 (ligA_2) Enzymes [BR:kut01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      JJ691_91610 (ligA_2) DNA replication proteins [BR:kut03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      JJ691_91610 (ligA_2) DNA repair and recombination proteins [BR:kut03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      JJ691_91610 (ligA_2)    NER (nucleotide excision repair)     GGR (global genome repair) factors      JJ691_91610 (ligA_2)    MMR (mismatch excision repair)     DNA ligase      JJ691_91610 (ligA_2)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       JJ691_91610 (ligA_2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 HHH PTCB-BRCT Nlig-Ia BRCT_2 Motif Other DBs NCBI-ProteinID:  QUQ71376 UniProt:  A0AAT9M6E4 LinkDB All DBs Position 10197270..10199423 Genome browser AA seq 717 aa AA seqDB search MTSTEDVPDEVRAHYGELAEQIRGHQFRYYVLDSPTIADGEFDVLLRELQGIEDKHPSLV TPDSPTQRVGGAFSTDFTAVDHLERLLSLDNVFNYEDLRAWADRVHKEIGEDSHFLCELK IDGLALNLLYEDGRLVRALTRGDGRTGEDVTLNVRTIKDIPERLTGTAEFPTPKLVEVRG EVFFRVEDFEELNAGLVEAGKPPFANPRNSAAGSLRQKDPKITASRPLRFICHGLGKREG FEPQRQSDAYRALAAWGLPVSPHTKLVKGIGEVEAHIAYWGEHRHDAVHEIDGIVVKVDE VALQRRLGSTSRAPRWAIAYKYAPEEATTKLLDIQVGVGRTGRVTPYAVTEPVLVAGSTV ARATLHNASEVKRKGVWIGDTIVIRKAGDVIPEVLGPVIDVRPDDAYEFVMPTDCPECGT TLRYEKEGDADIRCPNQQACPAQLRERLFYLASRKALDIEVLGYEAATALLEAGVIEDEG DVFDLDEEQLLRTELFRAQDKKSELGYKLSANGERLLANLDAAKDRDLWRVLVSLSIRHV GPSAARALAVTFGSVDRIFAASEEELAAADGVGPTIAAAVLEWHEWEWRRDIIEKWRAAG VRMEEEQDSSTPRVLEGLSIVVTGTLPNFSRDEAKEAIIVRGGKAVGSVSKKTSFVVVGE SPGTKHDKAVQLKVPVLDEDGFRVLLAQGPDAATEVATIGAEEEASAEGEAGAGEEA NT seq 2154 nt NT seq  +upstreamnt  +downstreamnt gtgaccagcaccgaagacgttcccgacgaggttcgcgcgcactacggcgagctcgccgag cagatccgcggacaccagttccgctactacgtcctggactcgccgacgatcgccgacggc gagttcgacgtgctgctgcgggagctgcagggcatcgaggacaagcatccgagcctggtc acgccggactcgccgacgcagcgggtgggcggcgccttctccaccgacttcaccgcggtg gaccacctggagcggctgctcagcctggacaacgtcttcaactacgaggacctgcgggcc tgggccgaccgggtgcacaaggagatcggcgaggactcgcacttcctgtgcgagctcaag atcgacggcctcgcgctgaacctgctctatgaggacggccggctggtgcgggcgctgacc cgcggcgacggccgcaccggcgaggacgtgacgctcaacgtccgcacgatcaaggacatc ccggagcggctgaccggcacggccgagttcccgacgccgaagctggtcgaggtgcgcggc gaggtgttcttccgggtggaggacttcgaggagctcaacgctggcctagtcgaggcgggc aagccgccgttcgccaacccgcgcaactcggcggccggctcgctgcgccagaaggacccg aagatcaccgcgagccgaccgctgcgcttcatctgccacggcctgggcaagcgcgagggc ttcgagccgcagcgccagtccgacgcctaccgggcgctggcggcatggggcctgccggtg tcgccgcacaccaagctggtcaagggcatcggcgaggtcgaggcgcacatcgcgtactgg ggcgagcaccggcacgacgccgtgcacgagatcgacggcatcgtggtcaaggtggacgag gtggcgctgcaacgtcgtctcggctccacgtcccgggccccgcgctgggcgatcgcctac aagtacgcgccggaggaggccaccaccaagctgctggacatccaggtcggcgtgggccgc accggccgggtcacgccgtacgcggtgaccgagccggtgctggtggccggttccacggtg gcgcgggcgacgctgcacaacgcgtccgaggtcaagcgcaagggcgtgtggatcggcgac acgatcgtcatccgcaaggccggcgacgtcatccccgaggtgctcgggccggtgatcgac gtccgtccggacgacgcctacgagttcgtgatgccgacggactgcccggagtgcggcacg acgctgcgctacgagaaggagggcgacgccgacatccgctgccccaaccagcaggcctgc ccggcccagctacgggagcggctgttctacctggccagccgcaaggcgctggacatcgag gtgctcggctacgaggcagcgaccgcgctgctggaggccggcgtcatcgaggacgagggc gacgtgttcgacctcgatgaggagcagctgctgcggaccgagctgttccgggcccaggac aagaagtccgagctgggctacaagctgtcggccaacggcgagcggctgctggccaacctg gacgcggccaaggaccgggacctgtggcgggtgctggtgtcgctgtccatccgccacgtc ggcccgtccgcggcccgggcgctcgcggtcacgttcggctccgtggaccggatcttcgcg gccagcgaggaggaactggccgcggccgacggtgtcggcccgaccatcgcggcggccgtg ctggaatggcacgagtgggagtggcgccgcgacatcatcgagaagtggcgcgccgcgggc gtgcgtatggaggaggaacaggactcctcgacgccgcgtgtgctggagggcctgtccatc gtcgtcaccggcacgctgccgaacttctcgcgggacgaggccaaggaggcgatcatcgtg cgcggcggcaaggccgtcggctcggtgtcgaagaagacctcgttcgtggtggtcggcgag agcccgggaaccaagcacgacaaggccgtccagctcaaggtgccggtgctggacgaggac ggctttcgggtgctgctggctcaggggccggacgcggcgaccgaggtggccaccatcggg gcggaagaggaagcctcggcggagggagaagccggagcgggggaggaagcctag

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