Kushneria phosphatilytica: FY550_15460 Help Entry FY550_15460       CDS       T06200                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism kuy  Kushneria phosphatilytica Pathway kuy03030   DNA replication kuy03410   Base excision repair kuy03420   Nucleotide excision repair kuy03430   Mismatch repair Brite KEGG Orthology (KO) [BR:kuy00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     FY550_15460 (ligB)    03410 Base excision repair     FY550_15460 (ligB)    03420 Nucleotide excision repair     FY550_15460 (ligB)    03430 Mismatch repair     FY550_15460 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:kuy03032]     FY550_15460 (ligB)    03400 DNA repair and recombination proteins [BR:kuy03400]     FY550_15460 (ligB) Enzymes [BR:kuy01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      FY550_15460 (ligB) DNA replication proteins [BR:kuy03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      FY550_15460 (ligB) DNA repair and recombination proteins [BR:kuy03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      FY550_15460 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      FY550_15460 (ligB)    MMR (mismatch excision repair)     DNA ligase      FY550_15460 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       FY550_15460 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_5 RNA_ligase HHH Motif Other DBs NCBI-ProteinID:  QEL12398 UniProt:  A0A1S1NT71 LinkDB All DBs Position complement(3320276..3321955) Genome browser AA seq 559 aa AA seqDB search MGKFAGVLVILLLVATPSLAMACPEPTALKADDNALAERIAQWDEAYYQHGQRLVSDGVY DSARRQLACLHQSRAGTLRPNDGVTHPFVHTGLEKLPDRAAMAHWIDAHRERSLWVQPKV DGVAVTLIYRDHRLVQAISRGDGVTGHDWTSQVQALSHVVQHLPDDAPAQLVLQGELYLR LSHHLQAEQGSVRARSIAAGLLQRTHLSTRAGERIGFFAWGWPEGPAELPRRNALLKQWG FTGVAALSQPVASVKEVARWRQHWFHTPLPFASDGIVVRQSRRPEGQLWQPEPPGWVVAW KYPASEVLATVKRVEFHIGRTGRMTPVLALAPVQLDDRQVTAVSVGSMARWRRLDIRPGD QVRIALAGLTIPRLEGREIAVQPRPTLQVPDERKYDRLSCLNLIPGCRQQFLARLTWLGG PHGLDLHGIGEGSWQAMVDAGLIHGLLDWLTLEPEQLAALPGVGEARARQWQQQFQQTLR QSDRRWLKALGIPSLPKEVWSSEAPVTFDQLAARSARQWQQFPGIGAVHAGQLVRFFTSV HIRSLWQQIRHPERQPNEA NT seq 1680 nt NT seq  +upstreamnt  +downstreamnt atgggaaagtttgcaggcgttctggtgatactgctgctggtggccacgccgtccctggcg atggcgtgccccgagcccacggcgctcaaggcagatgataatgcacttgccgaacgtatc gcccaatgggatgaggcgtattaccagcatggccagcgcctcgtcagcgatggcgtctat gacagtgcccgccggcaactggcttgtctccatcagtccagggcgggcacgctgcggcca aatgacggcgttacgcacccttttgtgcacaccgggctcgagaaattacccgatcgcgcc gccatggcccactggatcgatgcgcatcgcgagcgctcgctgtgggtacagcccaaggta gatggcgtggcggtgaccctgatctacagggatcaccggctggtgcaggcgatcagccgg ggggacggggtcaccggccacgattggacgtctcaggtgcaggcactatcgcatgttgtt cagcatctgcccgatgatgctccggcgcagctggtgcttcagggcgaactctatctgcgt ttgagtcaccatctgcaggctgagcaggggagtgtcagggcgcgcagcatcgcggccgga ctgcttcagagaacccacctttcgacccgtgcaggcgaacgcatcggtttctttgcctgg ggctggcctgaagggccggcagagctgcctcggcgcaatgcattgctgaaacagtgggga tttaccggtgtagcggccctgagccagccagtggcctccgtgaaggaagttgccaggtgg cgacaacactggtttcacacgccactgccatttgccagcgatggcattgttgttcgtcag agtcgccgccctgagggtcagctgtggcaacccgagcctcccggctgggtggtggcatgg aagtatccggccagtgaagtgctggctacggtgaagcgggtcgaatttcatatcgggcgt accggtcggatgaccccggtgctggcactggcaccggtacagctcgacgaccgacaggtc acggccgtcagtgtcggctcgatggcacgctggcgcaggctggatattcgtcctggtgat caggtgcgcattgccctggccgggctgaccattcctcgcctggaggggcgtgaaatagcc gtgcagccacggccgacgctgcaggtgcccgatgaacggaaatacgatcggctgagctgt ttgaacctgataccgggttgtcggcagcagtttctcgcacgactgacctggctggggggg cctcatggcctggatttgcacggcattggtgagggcagttggcaggccatggtggatgcc ggcctgattcatgggctactggattggctgacacttgagcccgagcagttggcggcatta ccgggcgttggtgaagcacgcgctcgtcagtggcagcagcagttccagcagacgctgcgt cagagtgatcgtcgctggctgaaggcgctgggtataccgtcgctgccgaaggaggtctgg tcatccgaagcccccgtgacctttgatcagctggccgcgcgctctgcccggcaatggcag cagttccccggtattggcgcggttcatgcaggacagcttgtgcgcttttttacgtctgta cacattcggtcactgtggcaacaaatacgtcatcccgaacgtcagccgaatgaggcctga

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