Ketogulonicigenium vulgare WSH-001: KVU_2442
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Entry
KVU_2442 CDS
T01909
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Pathway
kvl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KVU_2442 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvl03400
]
KVU_2442 (nth)
Enzymes [BR:
kvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KVU_2442 (nth)
DNA repair and recombination proteins [BR:
kvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KVU_2442 (nth)
Prokaryotic type
KVU_2442 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
DUF2464
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AEM42281
UniProt:
F9Y7I5
LinkDB
All DBs
Position
2584223..2584867
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AA seq
214 aa
AA seq
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MVVQLHYNVMREVFTRFRAASPTPEGELHYTNAYTLVVAVALSAQATDVGVNRATRALFE
VADTPQKMLDLGEERLIEHIKTIGLFRNKAKNVMRLSQILVDEFGGEVPSSRAALESLPG
VGRKTANVVLNIWWHFPAQAVDTHIFRIGNRSGICPGKDVVAVERAIEDNVPAEFQQHAH
HWLILHGRYICLARKPRCGDCLIADLCLFEEKTV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtacagctgcattataacgtcatgcgcgaggtctttacccgctttcgcgccgca
tctcccacccccgagggcgagctgcattacaccaacgcctatacgcttgtggtggcggtg
gccctgtccgcgcaggcgactgatgtgggggtgaaccgcgcgacgcgggcgctgttcgaa
gtggccgacacgccgcaaaagatgctggatctgggcgaagagcgtctgatcgaacatatc
aaaaccatcggcctgttccggaacaaagccaaaaacgtcatgcgtctgagccagattctg
gtggatgaattcggcggcgaggtgcccagttcacgcgcggcgctggaatcactgcccggc
gtggggcgcaagacggcgaatgtggtgctgaatatctggtggcatttccccgcgcaggcg
gtggatacccatatttttcgcatcggcaatcgcagcgggatttgtccgggcaaagatgtg
gtcgcggtcgaacgcgcgatcgaggataacgtccccgctgaattccagcagcacgcgcat
cactggttgatcctgcacggacgatacatctgccttgcacgcaagccgcgctgtggcgat
tgcctgattgctgatctttgtctgtttgaagaaaagactgtttaa
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