Kocuria varians: CIB50_0001043
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Entry
CIB50_0001043 CDS
T06882
Symbol
gdh_2
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
kvr
Kocuria varians
Pathway
kvr00220
Arginine biosynthesis
kvr00250
Alanine, aspartate and glutamate metabolism
kvr00430
Taurine and hypotaurine metabolism
kvr00910
Nitrogen metabolism
kvr01100
Metabolic pathways
kvr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
CIB50_0001043 (gdh_2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CIB50_0001043 (gdh_2)
00220 Arginine biosynthesis
CIB50_0001043 (gdh_2)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
CIB50_0001043 (gdh_2)
Enzymes [BR:
kvr01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
CIB50_0001043 (gdh_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT2
GDH_HM3
GDH_HM1
GDH_ACT3
GDH_ACT1
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
QMS56339
UniProt:
A0A7D7Q096
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All DBs
Position
1154570..1159540
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AA seq
1656 aa
AA seq
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MWTRPQWRGAQSWINEYYRSVPDADVAGADVQVLTERAETHREVGRVRGSDRLCIQVRED
HGQTVLYMVTTDMPFLVSTLTTEIAANWGGAELVLHPLLLASRDAASHELTALERVPNIS
AVSSGDTTAIPLTRDLVGEAAAGGDTQIAVESWIRMELHRSLDESARGELQRHIEKLVAD
VTRVSEDQVAMLQEAGVIAASMDPLEELTFPGGSQLPDVQAAKDFLEWLRDGNFVFMGIK
RYDLESDGEDAVLHSRPDTGLGLLRERGQEGHAQRLTGLGSLHARDHQVVFVTKANRRSS
IHRREYLDYIGVRTFGQDGEVDGEYLILGLFSRHAYSVPAQLTPLVKEKVERVVRDFGFL
PDSHSARDLMGIIEDYPRDELFHMSAEELYETASGVLGLNERRQTRLFLRQDTFGRFMSA
VVYLPRDRYNTSVRQRIEAQLFEAFDAEAIDFEVRLTSSSLARVFFRIRLPYTGEVREFD
HEELESRLRAAVRSWPESLDRAIGLEFDAEHALSLSTVWAEAFPGSYREDYEIEEAIQDL
RRCEELWGRDSDLPAEVRVAETGGQVRLNIYLTQALSLTELLPLLHNLGLRVLDQRPYTV
TPADGREFQLYDFGVELPAGVDPAGPEDAKTEDLIEDTLCAVLSGRSESDSLDRLVLTER
MGWRSVAVLRAYVRYLLQLGYSNSFEYIADTLVAYPEATAEISELFSASFDPQRFGDDDA
AREAARDAALERLGAVLDDVPSLDADRLFRALADVVSATLRTNVFQQRPTMAFKLDPGAI
PAAPQPRPAYEIWVWSPRVEGTHLRFGQVARGGLRWSDRREDFRTEVLGLVKAQMVKNAV
IVPTGAKGGFFPKQLPDPQADREAWLTEGREAYKLFIASLLDLTDDIERDTEVDDATDSD
AGDTVVHPEGVVRRDGDDSYLVVAADKGTAAFSDTANAISLERGFWLGDAFASGGSVGYD
HKAMGITARGAWESVKRHFFELGVDTQSEAFTVVGVGDMSGDVFGNGMLLSEHIHLIAAF
DHRDVFLDPTPDAAASYRERERLFTAGRTSWQDFDRSVISEGGGVYSRRDKSVPITPQVR
EALGIEDDVESMSPQELVRRVLLAPADLLYNGGIGTYVKASSETNQEVGDKANDAIRVNG
EDLRVKVVGEGGNLGLTQLGRIEAALNGVLVNTDAIDNSGGVESSDREVNIKILVDGMVQ
AGLLSPEERAEFIESMTDEVAELVLRTNVAQNVLLTTERARGVEFTETFIRLMHWLEETA
DLNRELEFLPSDEQLRERATQNEPLTGPELSVLTAYSKIQLTKALVDSDLAEDPWFHGTL
SQYFPAQIRERFGDELETHPLRKEIISTVVANQIVNYGGIAFAYRVVDDSGADLADMARA
FVAAMEIFELRDYAHQHAHLGADVPLELWNRMSLRMRRLLDRVVRWFLHRQIADSDIQEL
VNTYRPVVRMRFGTEQLMSTESQERTRAEAELAERQGVPRDLAVEWAELLDAYALLDVAR
LAESQGLTGPEGEVGVGPDGAASSSREALAATNEDGVSVQMVARVYFTLYDRYGLENLLN
RISALPQTTRWENMARIAMREDLYATLVSIAAQVLETPGADASEKVRAWEHENADRLERL
REVLDEIESMSDTDDFGSELAALSVALRTLRGALTD
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
gtgtggacgcgaccgcagtggagaggcgcgcagtcgtggatcaacgagtactaccgctcc
gtgccggacgcggacgtagcgggcgcggacgtgcaggtgctcaccgagcgagcggagacc
caccgcgaggtggggcgggtccgtggttcggaccgcctgtgcatccaggtccgggaggac
cacggccagacggtgctgtacatggtcaccacggacatgccgttcctggtctccacgctg
accacggagatcgcggcgaactggggcggcgcggagctcgtgctgcaccccttgctgctg
gcctcgcgggacgccgcctcgcacgagctcaccgcgctggagcgcgtgcccaacatctcc
gcagtctcctccggcgacaccacggccatcccgttgacccgggacctggtgggggaagcc
gcggcgggcggggacacccagattgccgtggagtcctggatccgcatggagctgcaccgc
tcgctggacgagtccgcgcgtggagagctgcagcgccacatcgagaagctcgtggcggac
gtgactcgggtgtccgaggaccaggtggccatgctgcaagaggccggggtgattgcggcg
tcgatggaccccctcgaggagctcactttcccgggcggctcgcagctgccggacgtccag
gccgccaaggacttcctcgagtggctgcgggacggcaatttcgtcttcatgggcatcaag
cgctacgacctcgagtcggacggcgaggacgccgtgctgcactcccgcccggacaccggc
ctcgggctgctgcgcgagcgcggtcaggagggccacgcccagcggctcacgggcctgggc
agcctccacgcgcgggaccaccaggtggtcttcgtgaccaaggcgaaccgccgctcctcg
atccaccgccgggagtacctggactacatcggggtgcgcacgttcggccaggacggtgag
gtggacggcgagtacctgatcctcgggctgttctcccgccacgcgtactcggtgcccgcc
cagctcacgccgctggtgaaggagaaggtggagcgggtggtccgggacttcggcttcctg
ccggactcgcactccgcccgcgacctcatgggcatcatcgaggactacccgcgggacgag
ctcttccacatgtccgcggaggagctctacgagaccgccagcggggtgctcgggctcaac
gagcgccgccagacccggctgttcctgcgccaggacactttcgggcgcttcatgtccgcg
gtggtctacctgccccgtgaccggtacaacacgtccgtacgccagcgcatcgaggcccag
ctcttcgaggccttcgacgccgaggccatcgacttcgaggtgcgcctgacgtcctcctct
ctggcccgcgtgttcttccggatccgcctgccctacacgggcgaggtgcgcgagttcgac
cacgaggagctcgagtcccggctgcgcgcggcggtgcgctcctggccggagtccctggac
cgggccatcggcctggagttcgacgccgagcacgcgctctccctgagcaccgtgtgggcg
gaggcgttccccggctcctaccgcgaggactacgagatcgaggaggccatccaggacctg
cgccgctgcgaggaactgtggggccgtgacagtgacctgcctgcggaggtccgggtggcc
gagaccggcggccaggtgcggctgaacatctatctcacgcaggccctgtccctgacggag
ctgctgccactgctgcacaacctgggcctgcgggtgctggaccagcgcccctacacggtg
accccggcggatgggcgcgagttccagctctacgacttcggcgtggagctgcccgcgggc
gtggacccggcgggtcccgaggacgcgaagaccgaggatctgatcgaggacacgctgtgc
gcggtgctctccgggcgctcggagtcggacagcctggaccgtctggtgctcacggagcgc
atgggctggcgctccgtggcggtgctacgcgcatacgtgcgctacctgctgcagctcggc
tactccaactccttcgagtacatcgcggacaccctcgtggcctacccggaggccaccgcg
gagatctccgagctgttctcggcgagcttcgacccgcagcgcttcggggacgacgacgcc
gcccgcgaggccgcgcgggacgcggcactcgagcgcctgggcgccgtgctggacgacgtc
ccgagcctggacgcggaccgcctgttccgcgcgctcgcggacgtggtctccgcgaccctg
cgcacgaacgtgttccagcagcggcccaccatggcgttcaagctggaccccggggccatc
ccggccgcaccccagccccgcccggcctacgagatctgggtctggtccccgcgcgtggag
ggcacgcacctgcgcttcggccaggtggcccgcggcgggctgcgctggtccgaccgccgc
gaggacttccgcacggaggtgctcgggctcgtgaaggcgcagatggtcaagaacgccgtc
atcgtgcccacgggtgccaagggcggcttcttccccaagcagctgccggacccgcaggcg
gaccgcgaggcgtggctgacggagggccgggaggcgtacaagctgttcatcgcctcgctg
ctggacctcacggacgacatcgagcgggacaccgaggtggacgacgccacggactctgat
gccggggacaccgtggtgcaccccgagggcgtggtgcgccgcgacggggacgactcctac
ctggtggttgccgcggacaagggcaccgccgcgttctcggacaccgccaacgcgatctcc
ctggagcgcggcttctggctcggggacgcgttcgcctccggcggctcggtgggctacgac
cacaaggccatgggcatcaccgcccgcggtgcgtgggagtccgtgaagcgccacttcttc
gagctcggcgtggacacccagtccgaggcgttcaccgtggtgggagtgggggacatgtcc
ggcgacgtgttcggcaacggcatgctgctctccgagcacatccacctgattgccgccttc
gaccaccgggacgtgttcctggaccccaccccggacgccgcggcctcctacagggagcgc
gagcggctgttcaccgccgggcgcacctcgtggcaggacttcgaccgcagcgtgatctcc
gaaggtggcggcgtgtactcgcgccgtgacaagtccgtccccatcacaccgcaggtgcgc
gaggccctggggatcgaggacgacgtcgagtccatgagcccgcaggaactcgtgcgccgc
gtgctgctggcccccgcggacctgctctacaacggtggcatcggcacctacgtgaaggcg
tccagcgagaccaaccaggaggtcggggacaaggccaacgatgccatccgcgtcaacggc
gaggacctgcgcgtgaaggtcgtgggcgagggcggcaacctggggctcacccagctgggc
cgcatcgaggccgcgctgaacggggtgctggtcaacacggacgcgatcgacaactccggc
ggcgtggagtcctccgaccgcgaggtgaacatcaagatcctcgtggacggcatggtccag
gccgggctgctctccccggaggagcgcgccgagttcatcgagtccatgacggatgaggtg
gccgagctcgtgctgcgcaccaacgtggcgcagaacgtgctgctgaccaccgagcgcgcc
cgcggcgtcgagttcaccgagacgttcatccgcctcatgcactggctcgaggagaccgcg
gacctcaaccgagagctggagttcctgccctcggacgagcagctgcgggagcgcgccacg
cagaacgagcccctcacgggcccggagctctccgtgctgacggcgtactcgaagatccag
ctcaccaaggcgctcgtggacagcgacctcgccgaggacccgtggttccacggcacgctc
tcgcagtacttcccggcgcagatccgggagcgcttcggagacgagctggagacccacccg
ctgcgcaaggagatcatctccacggtcgtggccaaccagatcgtcaactacggcggcatc
gccttcgcgtaccgcgtggtggacgactccggcgcggacctcgcggacatggcgcgcgcg
ttcgtggcggccatggagatcttcgagctgcgggactacgcgcaccagcacgcccacctg
ggcgcggacgtgcccctggaactgtggaaccggatgtccctgaggatgcgccgtctgctg
gaccgcgtggtccggtggttcctgcaccgtcagatcgcggactcggacatccaggagctc
gtgaacacctaccggcccgtggtgcgcatgcgcttcgggaccgagcagctgatgagcacc
gagtcgcaggagcgcacccgcgcggaggccgagctggccgagcggcagggcgtgccccgg
gacctcgccgtggagtgggccgagctgctcgacgcctacgccctgctcgacgtcgcccgg
ctcgcggagtcccagggcctcaccggccccgagggcgaggtgggcgtggggcccgacggc
gcggcgtcgtcgtcccgggaggcgctcgccgccacgaacgaggacggcgtgagcgtgcag
atggtcgcgcgcgtgtacttcacgctctacgaccgctacgggctcgagaacctgctcaac
cgcatcagcgcgctgccgcagaccacgcggtgggagaacatggcgcggatcgcgatgcgc
gaggacctctacgcgaccctcgtctcgatcgccgcgcaggtgctcgagacgccgggcgcg
gacgcctccgagaaggtccgtgcgtgggagcacgagaacgcggaccggctcgagcggctg
cgcgaggtcctggacgagatcgagtccatgtccgacaccgacgacttcggctccgagctc
gcggcactgtccgtggcgctgcggaccctgcgcggtgcgctgacggactga
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