Lysobacter antibioticus 76: LA76x_1263
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Entry
LA76x_1263 CDS
T04154
Name
(GenBank) radical SAM superfamily protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab00790
Folate biosynthesis
lab01100
Metabolic pathways
Module
lab_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
LA76x_1263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lab03016
]
LA76x_1263
Enzymes [BR:
lab01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
LA76x_1263
Transfer RNA biogenesis [BR:
lab03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LA76x_1263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
zf-CHCC
DUF5725
Motif
Other DBs
NCBI-ProteinID:
ALN79422
UniProt:
A0A0S2F786
LinkDB
All DBs
Position
1449350..1450027
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AA seq
225 aa
AA seq
DB search
MTAVATETAAASSERLRLTEIFLSLQGESNSIGWPTVFVRLTGCPLRCQYCDTAYAFHGG
EWWEFDAILAEVAQHGARHVCVTGGEPLAQKRCIALLQKLCDAGYEVSLETSGAIDIGPV
DPRVSRVLDIKTPDSREAHRNLWSNLPLLTARDQIKFVICSREDYEWSKGIVAEHGLTQI
CDVLFSPSFTQVKPSDLADWIVADRLQVRFQLQLHKILWNDEPGR
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgttgccaccgagacggccgcagcgtcgtccgaacgcctgcggctgaccgaa
atcttcctgtcgctgcaaggcgagtcgaacagcatcggctggccgaccgtattcgtgcgc
ctgaccggctgccccttgcgctgtcagtactgcgataccgcctatgccttccacggcggc
gaatggtgggagttcgacgcgatcctggccgaggtcgcccagcatggcgcccgccatgtc
tgcgtcaccggcggcgagccgctcgcgcaaaagcgctgcatcgcgctgctgcagaaactg
tgcgacgccggctatgaggtctcgctggaaacctccggcgcgatcgacatcggcccggtc
gacccgcgcgtttcgcgcgtgctcgacatcaagaccccggattccagggaagcccaccgc
aacctgtggagcaacctgccgctgctgaccgcgcgcgaccagatcaagttcgtgatctgc
agccgcgaggactacgagtggtcgaagggcatcgtcgccgagcacggcctgacccagatc
tgcgacgtgctgttctcgccgagcttcacccaggtcaaaccgagcgacctggccgactgg
atcgtcgccgaccgcctgcaggtacgattccaactgcagctgcacaagattctctggaac
gacgaaccggggcggtga
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