Labrenzia sp. PHM005: FJ695_12575
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Entry
FJ695_12575 CDS
T06152
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp00300
Lysine biosynthesis
labp00550
Peptidoglycan biosynthesis
labp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FJ695_12575
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FJ695_12575
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
labp01011
]
FJ695_12575
Enzymes [BR:
labp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FJ695_12575
Peptidoglycan biosynthesis and degradation proteins [BR:
labp01011
]
Precursor biosynthesis
Amino acid ligase
FJ695_12575
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Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QDG76637
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Position
2799468..2800937
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AA seq
489 aa
AA seq
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MHLEHLADGMDLPDTAKGLSISGLTADSRKVQPGFLFAAFKGSTVDGVRFVPKAVEAGAV
AILCSNDAADTVRAQVPASVAVLSSEEPRLTFARMAARYFGRQPDTIVAVTGTAGKTSVA
HFVRQIFQAAGHPSASLGTLGIIKPGGESYGGLTTPDPVALQKDLAELSDEGIQYAALEA
SSHGLDQYRLDGVQLTAAAFTNLGRDHMDYHPTIEDYLQAKLRLFEELLPAGGTVVVDPG
ETYADRILDIAANRKLPVFTVGETGQDLKLTGLKPSGAGQELTIETARGEYKITLPLIGR
FQVSNALIAAGLAIAAGNDTGATLRALENLKGAPGRLELAGQTVSGGLVFIDYAHKPDAL
DKALAALKPFANGKLSVVVGAGGDRDPGKRPLMGEAAARHADLVIVTDDNPRSEEPAAIR
KAVLQGAPSGLEIGDRAEAIAEGVKRLKSGDILCVAGKGHETGQIVGDTVIPFSDHDAVR
SAISQLGNT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttgagcacttagccgacggcatggatttgccggatacggcaaaaggcctttcg
atttcagggctgacggcagacagccgcaaagttcagccgggtttcctgtttgctgccttc
aaaggctccacagtcgatggcgtgcgcttcgtgccgaaagcggtcgaagccggtgcggtt
gcgatcctgtgttccaacgatgctgcagataccgtgcgtgcgcaggttccggcctccgtg
gctgtgctgagttctgaagagccacgtctcacattcgcgagaatggcggccaggtatttt
ggacgccaaccggacacaatcgtcgcggtcaccggtaccgccggaaagacgtctgttgct
cattttgtccgtcagatttttcaagccgctgggcatccctcagccagcctcggcacgctc
gggatcataaagccgggtggtgagagttacggcggtctgacaacacctgatccagtggca
ctgcagaaagatctcgcggagctttcggacgaaggcattcaatatgcggccctggaggcg
tcgtctcacggtctggatcaataccgtctggatggcgttcagctgacggcggccgccttt
accaatctcggtcgggatcatatggattaccatccgaccattgaagactaccttcaagcc
aagctgcgcctctttgaagagttgttgcccgctggcgggacagttgttgttgatccgggc
gaaacatatgccgaccggattttggacattgccgcaaatcggaagttgcctgtctttacc
gttggagagacagggcaggatctcaagctgaccggcttgaagccaagtggcgcaggccag
gagctgacgatcgagacagcgcgcggtgaatacaaaattaccttgccgctgatcggccgc
ttccaggtgtccaatgccttgattgctgctggccttgcgattgcggccggcaacgatacc
ggcgctaccctacgggctctggaaaacctgaaaggcgcaccgggacgtttggaacttgct
ggccaaacagtctccggcggccttgtcttcattgactatgctcataagccggatgccctg
gataaggcgcttgcggccttgaagccttttgctaacggcaaactgtctgtcgtggttggc
gcaggcggtgaccgggaccccgggaaacggccgctgatgggtgaggccgccgcccggcat
gcggatcttgtgatcgtgacggatgacaatccaagatccgaggaaccagcggcaattcgc
aaagccgtattgcaaggcgcgccgagcggattggaaatcggcgaccgggccgaagccatc
gccgaaggggtcaagcgcctgaaatccggtgatatcctgtgtgttgccggcaaaggtcac
gaaaccggccagattgttggcgacacagtgattccgttctcggaccacgacgccgttcgc
agcgccatcagccaactgggaaacacatga
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