Labrenzia sp. PHM005: FJ695_19080
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Entry
FJ695_19080 CDS
T06152
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
labp
Labrenzia sp. PHM005
Pathway
labp01501
beta-Lactam resistance
labp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FJ695_19080
01503 Cationic antimicrobial peptide (CAMP) resistance
FJ695_19080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labp02000
]
FJ695_19080
01504 Antimicrobial resistance genes [BR:
labp01504
]
FJ695_19080
Transporters [BR:
labp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FJ695_19080
Antimicrobial resistance genes [BR:
labp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FJ695_19080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
QDG77794
UniProt:
A0A4Y6RZH7
LinkDB
All DBs
Position
complement(4219671..4222829)
Genome browser
AA seq
1052 aa
AA seq
DB search
MFSRFFIYRPKFALVISIVITLAGLLGYVSLPVEQFPNITPPVVNVAATYTGANAEVLEE
TVAAPIEAQVNGVDDMIYMQSTSNDSGNYSLNVTFAVGTDPDIATVNVQNRVSQATSQLP
SEVTQNGVTVQKASTNMLLVVTLYSPEGTYDELFLSNYASIYMKDALARVQGVGRADVMT
DFAYAMRIWLDPDRLASLGMTPTDFINAVRDQNVQVAAGQIGAPPVPDGQQFQYTIKAEG
RLADAEQFEKIVLRTGSDGAVVTIGDVARVERGAQFYNASGQFNGQPSTVLAIYQAPGAN
ALAVADAVKARLESLSQNFPDDVAYAVPFDTTDFVQQSLNDVISTLFLTFLLVVSVVFIF
LGNWRATIIPTVAIPVSLIGTFGVLLALGMSLNTISLFALVLAIGIVVDDAIVVVENVER
IIADEGLGPKEATAKAMEQITGPVVATTLVLLAVFVPTIFMPGITGQLYSQFAVTISVSV
VISSINALTLSPALCGLILKARSGPPKGVMGMFDRGIMSIRDGYTSIVRRLVRVAVLSLV
VVAGAVAMIMTLGSTLPQGFLPLEDQGYLMVDVQLPDGAALGRTEGVTQRVVDLATATPG
VANIVLVNGYSILNGATSSNSALVIATMTGWDERQDPGLSINDILGKFWAQFSTIPGANI
IAFNPPPIPGLGTTGGVQAMLQQTAGGSPQDLASAVGSMVYSANQNPSIARAYSTFRANV
PQVFVDLDREKAKTLQVNVSDVFTTLQAYLGSFYINDFNIFGRVYKVMIQAEGRFRDRVS
DIGSLYVRSGDGTMVPLRSVLTTENVLGPQILTRYNMFRSAALMADPAPGASTGVVIDAV
DQAAVEAMPPGYAYEWTGTALQQQGAGSIVMFILLLSVIFTYLFLVAQYESWTMPVAILM
SVTFALLGALVAVFLTGGDVNLYTQIGMIMLIGLGAKNAILIVEFAMEQRDSGKSIKDAA
IEAAHLRFRAVMMTALSFLLGVVPLMTASSAGAASQKAIGFAVFGGMFFATTIGVLLIPV
LYASLQTMRETVKGWFGDTPSVPGEERSQTAS
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgttttcacgcttttttatctaccggccaaaatttgcgctggttatttccattgtcata
acgctcgctggtttgctcggctatgtctcgcttccggttgagcagtttcccaatatcaca
ccgccggtggtaaatgtcgctgcgacttacacgggcgcaaacgcggaagttttggaagaa
actgtggctgcgcctattgaggcgcaggtgaacggcgttgacgacatgatttacatgcag
tcgacgagcaacgacagcggcaactattcgctgaacgtgacatttgccgttggaacggac
cctgatattgcgactgtcaacgttcagaaccgggtaagccaggcaaccagccagttgccg
tccgaagtgacgcagaatggtgtcacagtccagaaggccagtaccaacatgctgctggtg
gtgacgctctattcgcctgagggcacgtatgatgagctgtttctgtcgaactatgcctca
atctatatgaaggacgcgcttgcgcgtgtccaaggcgtaggccgtgcggatgtaatgacc
gactttgcatatgcaatgcgcatttggctggatccggacaggctagcaagtctcggcatg
acaccgacagacttcatcaacgcagtgagggatcaaaacgtccaggttgctgctgggcag
attggtgcaccgccggtgccggacggccagcagttccagtataccatcaaggctgaaggc
cggttggccgacgcagaacaatttgaaaaaatcgttttgcgaactggttcggatggggcg
gttgttacgatcggagatgttgcccgtgttgaacgcggcgcgcaattctacaatgcgagt
ggccagtttaatggtcagccgtcgaccgttctggcgatttatcaggctccgggcgcgaat
gcgctcgcggtggcagacgcggtgaaggcacggctcgaaagtctttcccaaaattttccg
gacgacgtggcatacgctgtgccgttcgataccactgactttgttcaacagtccctcaat
gacgtgatatcgaccttgttcctgaccttccttttggtggtgtcggtggtgttcattttt
ctcggaaactggcgggcgacgatcattccgactgtcgccataccggtttcactgattggt
acctttggggttctcctggctctgggcatgtcgttgaacacgatttctctgttcgcactt
gtgctggcgattgggatcgtggtggatgatgcgatcgtcgtggtagagaacgttgaacgg
atcatcgcggacgagggactgggcccgaaagaggcaacagctaaggccatggaacagatt
actgggcccgtggttgcgacaactcttgttctgctcgccgtttttgtcccgacgattttc
atgcccgggatcacaggtcagctttattcccagttcgcagttacaatttccgtatcggtt
gttatttcctcgatcaatgctttgacactgtctccagcattgtgcgggctcatcttgaaa
gccagatccgggccgccaaaaggcgtcatgggtatgttcgaccgggggattatgtccatc
cgggatgggtatacgtcgattgtgcgcaggcttgtgcgggtcgcggttctttcgcttgtc
gtcgttgctggtgcagtcgcaatgatcatgacgctcggaagcacgctgcctcaagggttt
cttccgctggaagaccaaggataccttatggtcgatgtccaattgccggacggcgcagct
cttggccgtacggaaggcgtgacccagcgtgtggtcgatctggcaaccgcaacgccaggt
gttgcaaacatcgttctggtcaatggttattcaattttgaatggtgcgacctcttcgaat
tctgctctggtcattgcaaccatgaccggctgggatgagcggcaggatccaggtcttagt
atcaatgatattctgggcaagttctgggcccagttctcgacgataccaggtgcgaacatt
attgccttcaaccccccaccgatccccggtcttggcaccacgggcggagtgcaagccatg
ttgcagcaaacggctggcggaagtccgcaggaccttgcatcagcggttgggtcgatggtc
tattcggccaaccagaacccgtctatcgccagggcgtattccacattccgagcgaacgtg
ccgcaagtctttgttgatctcgaccgggaaaaggccaagacactacaagtcaatgtctcg
gatgtgttcacgaccctacaggcctatctcgggtcgttttatatcaacgacttcaacata
tttggccgtgtctacaaggtcatgatccaagctgagggtcgtttccgcgacagggtcagt
gatattggaagtctttatgtccggtccggagacggcaccatggtgcccttgcgcagtgtt
ctgacgacagaaaatgtgctcggaccgcaaattcttacgcggtacaacatgttccgctcg
gcagccttgatggctgatcctgcacccggcgcttcgaccggggttgtgatcgacgctgtc
gatcaggctgctgttgaagctatgccgccgggatatgcatacgaatggaccggtactgcg
ctgcaacagcaaggggcggggtctatcgttatgttcatcctgttgctgtcagtgatcttc
acctatctcttcctggttgctcaatacgagagctggacaatgcctgtggcgatcttgatg
tcggttacatttgcgttgttgggcgctcttgtcgcggtgttccttaccggtggggatgtc
aatctttacacgcaaattggcatgatcatgctgatcggtcttggggcaaaaaacgcaatt
ttgattgttgagtttgctatggagcagcgagacagtggcaaatcgatcaaggatgcggca
atcgaggcggcgcacttgaggttccgggcggtgatgatgacagccttgtccttcttgctg
ggtgttgttccgctaatgacagcatcaagtgccggtgctgccagtcaaaaggcgatcggg
tttgcggtttttggcggcatgttcttcgcaacgaccatcggagtgttgctgatccctgtc
ctctatgcatcgcttcagaccatgcgtgaaaccgtcaaaggctggtttggggacactccg
agcgttccaggggaagaaaggtcccagacagcctcctag
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