Labrenzia sp. VG12: CHH27_11420
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Entry
CHH27_11420 CDS
T04984
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr00300
Lysine biosynthesis
labr00550
Peptidoglycan biosynthesis
labr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CHH27_11420
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CHH27_11420
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
labr01011
]
CHH27_11420
Enzymes [BR:
labr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CHH27_11420
Peptidoglycan biosynthesis and degradation proteins [BR:
labr01011
]
Precursor biosynthesis
Amino acid ligase
CHH27_11420
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
HEAT_ECM29
Motif
Other DBs
NCBI-ProteinID:
ASP33778
UniProt:
A0A222F4F0
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Position
complement(2445008..2446477)
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AA seq
489 aa
AA seq
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MDLDYLAAGLAVPDAARDLKIAGLTADSRKVQPGFLFAAFKGAAVDGTRFAPNAVAAGAV
AILCAEEAADAVRAACGGDVIVLGADEPRQAFARMAARFFGAQPDTIVAVTGTAGKTSVA
HFVRQIFQGAGHPAASLGTLGIVKPDGESYGGLTTPDPVALHQQLSALEDEGINHAAMEA
SSHGLDQYRLDGVRLTAAAFTNLGRDHMDYHPTIEDYLRAKLRLFSELLPAGGTVVVDPG
EKYADRVLAVAEERGLPVFTVGETGKDLKLTGLKPAGAGQELTLQTARGEYKVTLPLIGR
FQVSNALIAAGLAIASGMDTGAALRALENLKGAPGRLELAGKTGEGGLVFVDYAHKPDAL
DNALAALKPFAGGRLSVVVGAGGDRDPGKRPLMGEAAARHADLVIITDDNPRSEDPASIR
KAVLGGAPDALEIGDRFEAIAEGVRRLKKGDILCVAGKGHETGQIVGDTVIPFSDHEAVK
RAISLEGNT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggaccttgactatcttgccgccggccttgcggtgccggatgcggccagggatctcaaa
atagccgggcttacggccgacagccgtaaggttcagcccggctttctgtttgcagctttc
aagggtgccgctgtcgacggcaccagatttgccccgaatgccgttgcagccggagctgtc
gcgatcctgtgcgctgaagaggccgccgacgccgtgcgtgccgcctgtggcggcgacgtc
atcgtcctcggtgcggatgagcctcggcaggcctttgcccgaatggcggcacggtttttt
ggtgcacagcccgacacgatcgtcgccgtcaccggaaccgccggcaagacttcggtcgcc
cattttgtccggcagatctttcagggagcaggtcatcccgctgccagcctcggcacgctt
ggcatcgtcaagccggatggcgagagttatggcggattgacgacgcccgatccggttgcc
ctgcatcagcaactgtcggcgctggaagatgaaggtatcaatcatgcggccatggaggcc
tcgtcccacgggctcgatcagtatcgcctcgatggtgtgcgcctgacggctgccgcgttc
accaatcttggccgcgaccacatggattaccatccgacgatcgaggattacctgcgcgcc
aagctgcggctcttttccgagttgctgccggccggcgggacggttgtcgtcgatccgggt
gaaaaatatgcggaccgcgtgctggccgttgccgaagaacgcggccttccggtgttcacg
gtcggagaaaccggcaaggacctgaaactgaccgggttgaaaccggccggtgccggccag
gagctgacccttcagaccgcgcgcggcgaatacaaggtgaccctgccgctgatcggccgg
ttccaggtctccaatgccctgatcgcggctggtcttgccattgcctccgggatggacaca
ggcgcggccctgcgcgcccttgaaaacctgaagggcgcaccgggacggctggagctcgcc
ggtaaaacaggcgagggcgggctggtcttcgtcgactacgcgcataaaccggacgctctc
gacaatgcactggccgctttgaagccgtttgccggcggcaggctttctgttgttgtcggg
gccggcggcgacagggatcccggaaaacgtccgttgatgggagaggctgccgcgcgtcat
gccgatctggtcatcatcaccgacgacaatccgcgttcggaggatcctgccagcattcgc
aaggcggttcttggcggcgcgccggacgcgctggaaattggcgaccgtttcgaggcgatt
gccgagggggttcgccggctcaagaagggcgatatcctgtgtgttgccggaaaaggccac
gaaacgggccagattgttggcgacacagtgattcccttttccgaccacgaagcagtgaaa
cgcgccatcagccttgaaggaaacacatga
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