Labrenzia sp. VG12: CHH27_19630
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Entry
CHH27_19630 CDS
T04984
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHH27_19630 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
labr03400
]
CHH27_19630 (nth)
Enzymes [BR:
labr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CHH27_19630 (nth)
DNA repair and recombination proteins [BR:
labr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHH27_19630 (nth)
Prokaryotic type
CHH27_19630 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ASP35177
UniProt:
A0A222F7V1
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All DBs
Position
complement(4220338..4221153)
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AA seq
271 aa
AA seq
DB search
MSQAKSPAAAKASKRPASKAKPKRKAPSVDNPGRVLKRSRYSKAETYAIFQRFHADNPEP
EGELDYVNAYTLLVAVVLSAQATDVGVNRATKHLFEIADTPEKMVALGEDKVREEIRTIG
LFKTKAKNVILLSEQLIRDHGGEVPEDREALEKLPGVGRKTANVVLNIFFGHPTIAVDTH
LFRLGNRIGIAPGKTPLDVEKAMEKAVPKEFSLHAHHWLILHGRYICKARKPECRRCVIY
DLCRSPEKEPFDAVPEIALRTKAQIDKESAA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcaaagagccccgccgccgccaaggcatccaaacgccccgcctcgaaagcc
aagccaaaacggaaagcgccctccgtggacaatccgggcagggtcctgaaacggtctcgc
tattccaaggccgagacctacgccattttccagcgctttcatgccgacaatccggaaccg
gaaggcgaacttgactatgtcaacgcctatacgctgctggtcgccgtggtcctgtcggca
caggcaaccgatgtcggtgtcaaccgggcaaccaaacacctgttcgagattgccgacaca
cctgagaagatggtcgcgctgggcgaagacaaggtgcgcgaggaaatccgcaccatcggt
cttttcaagaccaaggccaagaacgtcattctcctgtccgaacagctgatcagagatcat
ggcggcgaggttccggaagaccgcgaagcgctggaaaagctgcccggcgtcggccgcaag
accgccaatgtggtgctgaacatctttttcgggcatccgaccattgccgtcgacacccac
cttttccgcctcggcaaccgtatcggcatcgcaccgggcaagacgccactggatgtcgaa
aaggcgatggaaaaggcggtgcccaaggagttttccctgcatgcccaccactggctgatc
ctgcatgggcgctacatctgcaaggcgcgcaaaccggaatgccggcgctgcgtcatctac
gatctctgccgcagcccggaaaaggaacctttcgacgccgttccggagatcgctcttcgc
accaaagcccagatcgacaaggagagcgccgcgtga
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