Labrenzia sp. THAF35: FIU93_05830
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Entry
FIU93_05830 CDS
T06351
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
labt
Labrenzia sp. THAF35
Pathway
labt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU93_05830 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
labt03400
]
FIU93_05830 (nth)
Enzymes [BR:
labt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FIU93_05830 (nth)
DNA repair and recombination proteins [BR:
labt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIU93_05830 (nth)
Prokaryotic type
FIU93_05830 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QFT66286
UniProt:
A0A9X7NJJ3
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All DBs
Position
1260204..1261019
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AA seq
271 aa
AA seq
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MTQAKSPSKTAAARRPAKSKQTRRKAPSVDNPGKVLKRSRYTKAETFAIFQRFHADNPEP
KGELDYVNAFTLLVAVVLSAQATDVGVNRATRHLFQIADTPEKMVALGEDRVREEIKTIG
LYKNKAKNVILLSEQLIRDHGGEVPEDREALEALPGVGRKTANVVLNIFFGHPTIAVDTH
LFRLGNRIGIAPGKTPLDVEKAMEKVVPVEFALHAHHWLILHGRYICKARKPECRRCVIY
DLCRSTEKELFDAVPDIALRTKALIEKETVA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagcaaagagcccttccaagactgcggcagcacgccggcccgcaaaatccaaa
cagacccggagaaaagcaccctccgtggacaaccccggcaaggtgttgaaacggtcccgc
tatacgaaggcggaaacctttgcgatcttccagcgcttccatgccgacaacccggaaccg
aagggcgaactggattatgtcaatgctttcacgcttctggttgccgtggtgctgtcggca
caggcaaccgacgttggcgtgaaccgggcaacaagacacctattccagattgccgacaca
ccggaaaagatggtggcgctcggggaggaccgggtgcgggaggaaataaagacgatcggc
ctttacaagaacaaggccaagaacgtcatcctgttgtccgagcagctgatccgcgaccat
ggcggcgaggttccggaagaccgcgaagcgctggaagcgctgcccggtgtcggccggaag
accgcgaatgtggttctgaacatcttcttcggccacccgaccattgccgtcgatacgcat
ctgtttcgcctgggcaaccgcataggcattgcccccggcaagacgcctctcgacgtggaa
aaagccatggagaaggtcgtgccggtggaatttgcgctccatgcccaccactggctgatc
ctgcatggccggtacatctgcaaggcgcgcaaaccggagtgccggcgctgtgtgatttac
gatctgtgccggagcacggagaaagaactttttgatgcggtgccggatattgccctgcgc
accaaagcccttattgaaaaggaaacagttgcgtga
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