Labrenzia sp. THAF35: FIU93_09395
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Entry
FIU93_09395 CDS
T06351
Symbol
acrB2
Name
(GenBank) Multidrug efflux pump subunit AcrB
KO
K18138
multidrug efflux pump
Organism
labt
Labrenzia sp. THAF35
Pathway
labt01501
beta-Lactam resistance
labt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FIU93_09395 (acrB2)
01503 Cationic antimicrobial peptide (CAMP) resistance
FIU93_09395 (acrB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labt02000
]
FIU93_09395 (acrB2)
01504 Antimicrobial resistance genes [BR:
labt01504
]
FIU93_09395 (acrB2)
Transporters [BR:
labt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FIU93_09395 (acrB2)
Antimicrobial resistance genes [BR:
labt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FIU93_09395 (acrB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF7338
Motif
Other DBs
NCBI-ProteinID:
QFT66988
LinkDB
All DBs
Position
complement(2006442..2009579)
Genome browser
AA seq
1045 aa
AA seq
DB search
MSAFFIDRPIFAWVIAIVTMLAGALAITTLSVSQYPQIAPTTVNISANYPGADAATVENS
ITKVIEQGMSGIDYLDYMTATSSNSGSAQISLTFSSKADPDVAQMQVQNKLQLVSSQLPQ
IVQNTGITVTKSTSGFLMVLGFVSTDGRLTSTDIADYVDNTLNDTLKRVEGVGETRLFGS
GYAMRIWLDPTKLLKYNLMPSDVSSAIQAQNTQVSAGQLGGLPQAEGQQLNATITASSRL
QTAQQFRDIILKSSEDGSVVRLNDVARVEVANESYSTSAFYNGMPASGLAVSLATGANAI
DTAQRVRDTIDRLSSTLPAGVDVVYPYDTTPFVKLSIEKVVHTLLEAVVLVFLVMYLFLQ
NLRATIIPTLAVPVVLLGTFGVLALFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLPPREATRKSMNEITGALIGIAVVLSAVFVPMAFFGGSVGIIYRQFSITIVSAMVL
SVFVALILTPALCATMLKQGDHGHKRGPFAWFNKGFDASANGYRAANGGILKRGKRFLVL
FIAIGVAMGWMFNRLPSSFLPQEDQGILIAMVNLPVGATQGRTLTVLDKVRTHFMENEPD
AVDSVFTVAGFGFGGQGQNVGLAFIRMKDFTEREDPRLAAQAVAGRAMGAFSQFKDARVF
ALAPPAIQGMGNTNGFSFYLQDINGAGHDRLMEVRNQLLGMAAQSGKLAATRPNGQEDQP
QFKVDIDTQKARLLDLGIPDINDTLSIAWGSDYVNDFMDRGRIKPVYVQADAPFRMQPSD
LDLWHVRNSNGDMVPFSAFASSRWTYGSPRLERFNGASAVELQGQAAPGISSGDAMAEID
ALVAQLPAGFVHEWTGLSYQERLSGDQAASLYAISILIVFLCLAALYESWSIPFAVMLSV
PIGVFGALAAALIFGQTNDVYFKVGLLTTIGLAAKNAILIVEFAIEQQRQGKDLLQATLD
AARQRLRPILMTSFAFILGVTPLAIATGAGSGAQNSIGIGVMGGMIASTVLGIFFVPLLF
VTVRRIFSRKQTKEAAPDTSGSKAH
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctttcttcatcgacaggccgatctttgcctgggtcattgccattgtcacgatg
ctggcaggcgcactggccatcacgaccctttccgtttcgcaatatccgcaaattgcaccg
accaccgtcaacatcagcgccaattatccgggcgccgatgcggcgacggtcgaaaactcg
attaccaaggtgatcgaacagggcatgtcggggatcgattacctggactacatgaccgcg
acgtcttcgaactccggttcagcccagatttcgctgacgttctcctccaaggcggatccg
gacgttgcccagatgcaggtgcagaacaagctgcagctcgtctccagccagctgccgcag
atcgtccagaacacgggcatcaccgtcaccaagtcgacttccggctttctgatggtgctc
ggcttcgtttcgacggacggacgcctgacttccaccgacattgccgactatgtcgacaac
acgctcaacgacacgctgaaacgcgtcgagggcgtcggtgaaacccggctgttcggctcc
ggctatgccatgcgcatctggctcgacccgacgaaattgctgaaatacaacctgatgccg
agcgatgtcagttccgcaatccaggcccagaacacccaggtttccgccggccagcttggc
ggtctgccgcaggccgagggtcagcagctcaacgcgaccatcaccgcctccagccgcctg
cagactgcacagcagttccgcgacatcattctgaagagctccgaagacggctctgtcgtt
cgcctcaacgatgtcgcccgggtagaagttgccaacgaaagctacagcacctctgccttc
tacaacggcatgccggcgtccggccttgcggtctcgcttgcgaccggtgcaaacgccatc
gacaccgcccaacgggtacgcgacaccatcgaccggctctcctcgacgctgcctgccggg
gtcgatgtggtctatccctatgacaccacccccttcgtgaagctctccatcgagaaggtg
gtccacacactgctggaagcagtcgtgctggtgttcctggtgatgtatctcttcctgcag
aacctgcgcgcgaccatcattccgacacttgccgtgcccgtggttctgctcggcaccttc
ggggtgcttgcgctgttcggctattcgatcaacacgctaacgatgttcgccatggtgctc
gccatcgggctattggtggatgacgccatcgtcgtggtggaaaacgtcgaacgcgtgatg
gcggaggaaggtttgccaccacgcgaggcaacccgcaaatccatgaacgagatcaccggt
gccttgatcggcattgcggtggtgctgtccgccgtcttcgtgccgatggcgtttttcggc
ggctccgtcgggatcatttaccgccagttctcgatcaccatcgtttcggccatggtgctg
tcggtattcgttgcgctcatcctgacgcctgcgctgtgcgccaccatgctgaagcagggt
gaccacggccataagcgtggtcccttcgcctggttcaacaagggtttcgacgcaagcgca
aacggctacagggcggcaaatggtggcatcctgaagcgtggcaagcgcttccttgtgctg
ttcatcgcaatcggcgttgccatgggctggatgttcaatcgcctgccaagctccttcctg
ccgcaggaagaccagggcattctgattgccatggtcaacctgcccgttggcgcgacccag
ggccggacactgaccgtgctcgacaaggtacgcacccacttcatggagaacgagccggat
gcggtcgacagtgtcttcaccgtcgccggcttcggtttcggcggtcagggacagaatgtc
ggcctcgccttcatccgcatgaaggacttcaccgagcgcgaagacccgcggcttgccgcc
caggcagttgcaggccgtgccatgggagccttctcgcagttcaaggacgcccgtgtgttc
gcccttgccccgcctgccattcagggcatgggcaacaccaacggcttttcgttctacctg
caggacatcaatggcgccggtcatgaccggctgatggaagtccgcaaccagttgctgggc
atggcggcacaatccggcaaactggcggcgacacggcccaacggccaggaagaccagcca
cagttcaaggtcgacatcgacacgcagaaagcgcgcctgctcgacctcggcatcccggac
atcaacgacaccctgtcgattgcctgggggtccgactacgtcaacgacttcatggaccgt
ggccgcatcaagccggtgtatgtgcaggccgatgccccgttccgcatgcagccgtccgat
ctggacctgtggcacgtgcgcaattccaatggcgacatggtgcccttcagcgctttcgcc
tcatcgcgctggacctatggttccccgcggctcgagcgcttcaacggcgcgtcggccgtg
gaactgcagggccaggcggctcccggcatcagctcgggtgacgcgatggcggaaatcgat
gcgctcgtggcccagcttccggcaggcttcgttcatgaatggaccggcctttcctatcag
gaacggctttcgggcgatcaggccgcatcgctgtatgcgatctcgatcctgatcgtgttc
ctgtgccttgccgccctttatgaaagctggtcgatacccttcgcggtgatgctgtcggtc
ccaatcggcgtcttcggcgccctggcggcggccctgattttcgggcaaaccaacgacgtc
tacttcaaggtcggcctgctgacgaccatcggcctggcggcgaagaatgccatcctgatc
gtggagttcgccatcgaacaacaacgacagggcaaggacctgctgcaggcgacactggac
gctgctcgccagcggctccggccgatcctgatgacgtccttcgccttcatcctgggtgtg
acgccactggcgattgccaccggggcaggttcgggtgcgcagaactccatcggcatcggc
gtcatgggcggcatgatcgcctccaccgtgctcggcatcttcttcgtgccgcttctgttc
gtcaccgtgcggcgcatcttcagccgcaagcagacgaaggaagcagcccccgacacttca
ggcagcaaagcccattga
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