KEGG   Lacibacter sediminis: H4075_13255
Entry
H4075_13255       CDS       T06746                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
lacs  Lacibacter sediminis
Pathway
lacs01501  beta-Lactam resistance
lacs01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:lacs00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    H4075_13255
   01503 Cationic antimicrobial peptide (CAMP) resistance
    H4075_13255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lacs03036]
    H4075_13255
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lacs02000]
    H4075_13255
   01504 Antimicrobial resistance genes [BR:lacs01504]
    H4075_13255
Chromosome and associated proteins [BR:lacs03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    H4075_13255
Transporters [BR:lacs02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   H4075_13255
Antimicrobial resistance genes [BR:lacs01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    H4075_13255
SSDB
Motif
Pfam: Beta-barrel_RND RND-MFP_C BSH_RND HH_MFP_RND Biotin_lipoyl HH_EMRA BSH_CusB BSH_YknX HH_YBHG YknX_C BSH_CzcB Beta-barrel_RND_2 HH_CzcB ABC2_membrane_5 RRM_Rrp7 BSH_YhbJ
Other DBs
NCBI-ProteinID: QNA43051
UniProt: A0A7G5XC48
LinkDB
Position
3119963..3121048
AA seq 361 aa
MKRIFILAIVATVFIFSSCKHKTEEKEAETKFLVTSPIERDTIVYKEYVGQVQSSSHIEI
RSQERGYLEKIFVDEGQFVKKGTLLFKIMPIIYQAEVAKAKAEMEFAEIEYKNTKSLSDN
NVVSPNELALAKAKLDKAKAELALAQAHLGFTEIRAPFDGIMDRFQKRLGSLIDEGELLT
TLSDNSRMWVYFNVPEAEYLDYIQKAKSASAQKVQLQMANKELFELPGVVETIEADFNNE
TGNIAFRATFQNPKGILRHGETGNIMMPVNLKNAVLIPQKATFDVLDKKFVYIVDENNVL
KARQITIAQELPHLYIVASGLRATDKILAEGLGKVKNNEKITYDFVPFAKELAELNNLHA
E
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaagaggatatttattctcgccattgtggcaactgtatttattttttcatcctgcaaa
cacaaaacggaagaaaaagaagcagaaacaaaattcttagtcaccagccctattgaacgt
gatacgatcgtttacaaagaatatgttggtcaggttcagtcttcgagtcatattgaaata
cgttcgcaggaaagaggttatctcgaaaagatctttgtagatgagggacagtttgtaaag
aaaggtaccctgctgttcaagatcatgcccattatttaccaggcagaagtagcaaaagca
aaagccgaaatggagtttgctgaaattgaatacaagaacaccaaaagtctttccgataac
aatgttgtatcgcccaatgaacttgcgcttgccaaagcaaagctggataaagcaaaagca
gagctggccttagcacaggcacatttaggttttacagaaatacgtgcaccgtttgatggt
atcatggatcgttttcagaaacgtttaggaagcctcatcgacgaaggcgaattgctcact
acactttctgacaacagcaggatgtgggtatactttaatgtacctgaagccgaatacctc
gactatattcagaaagcaaaatcagcaagcgcacaaaaagtgcaactgcaaatggccaac
aaagaattgtttgagttacctggtgttgttgaaaccattgaagctgattttaataatgaa
acaggcaacatcgctttcagagcaacattccaaaatccaaaaggaattcttcgccacggt
gaaacaggaaacattatgatgcctgttaatctaaaaaatgctgtactcattccgcaaaaa
gcaaccttcgatgtgctggataaaaagtttgtgtacatcgttgatgaaaacaatgtactg
aaggcaagacagatcaccatcgcacaggaattaccacacttatatatcgttgcttcgggg
cttagggcaacagataaaattcttgcagaaggtttaggtaaggtgaagaacaacgagaag
atcacctatgattttgttccttttgcaaaagaattagctgagttaaacaatttacacgcc
gagtaa

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