Lacibacter sediminis: H4075_16865
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Entry
H4075_16865 CDS
T06746
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
lacs
Lacibacter sediminis
Pathway
lacs00300
Lysine biosynthesis
lacs00550
Peptidoglycan biosynthesis
lacs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H4075_16865
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H4075_16865
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lacs01011
]
H4075_16865
Enzymes [BR:
lacs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
H4075_16865
Peptidoglycan biosynthesis and degradation proteins [BR:
lacs01011
]
Precursor biosynthesis
Amino acid ligase
H4075_16865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
HTH_micro
DUF1307
Motif
Other DBs
NCBI-ProteinID:
QNA43733
UniProt:
A0A7G5XE30
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All DBs
Position
complement(3977588..3979054)
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AA seq
488 aa
AA seq
DB search
MAELKDILYKVHLRSVHGSTNVDVNDLQIDSRMVKPGTCFIAIKGVSVDGHEFINKAIEL
GAIAVVCEVLPEQLNDDINYIQVANSAEAAGFMANQFFGNVSEQMKVIGVTGTNGKTTIA
TLLFKLFSGLGYRCGLISTVEYHVGDKVFPSTHTTPDVISLNSLLKQMYDAGCTYVFMEC
SSHAIHQHRITGIHFTGALFSNITHDHLDYHKTFDEYIKVKKSFFDGLGADAFAISNKDD
KRGEVMLQNTKAKKLYYGLKNIADFKGKILENSLTGLQMMVNNDDVHFRLIGEFNAYNLL
AVYGAAICLQEDKLKVLQVLSGVTGAEGRFDYLISPKDLILGIVDYAHTPDALENVLATI
KKLRRGHEQIITVVGCGGDRDKTKRPVMGEVACELSDRVIFTSDNPRSEDPLEILADMEF
GLSSAARRKFISIADRKEAIKTAVSLAKHEDIILVAGKGHEKYQDIKGVKYEFDDKKVLE
QMFELLER
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcagaattaaaagacatattgtataaagtgcacctgcgcagtgttcacggatcaacc
aatgttgatgtgaatgatctgcagatcgattcacgtatggtgaagccgggcacttgcttt
attgctattaaaggtgtgtctgttgatggtcatgaattcatcaataaagcaattgagttg
ggtgcaatagcagtggtatgtgaagtattgccggaacaattgaatgatgatataaactat
atacaggttgccaacagtgcagaggcagcaggctttatggccaaccagttctttggaaat
gtgagtgagcaaatgaaagtgattggtgtaacaggcacaaatggaaaaacaaccatcgct
acattattatttaaactgttcagtggtttaggttacagatgcggattgatctcaacggtt
gaatatcatgtaggcgataaagtatttccatcaacacacacaacacctgacgtcatcagt
ttaaacagcttactaaaacagatgtacgatgccggttgcacttatgttttcatggagtgc
agcagtcatgctattcatcagcatcgtattaccggcatccatttcaccggcgcattgttc
agcaatatcacacacgatcacctcgattatcacaaaacctttgatgaatacatcaaagta
aaaaagagcttttttgatggacttggggctgatgcgtttgcgatcagtaataaagatgat
aaaagaggtgaggtgatgttgcagaatacaaaagcgaagaagttgtattacgggttgaaa
aacatcgctgatttcaaaggaaagatactggagaacagtctcacaggtttgcagatgatg
gtgaacaacgatgatgtgcatttccgtttgatcggtgaattcaatgcatacaatttatta
gccgtatatggtgcagctatatgcttgcaggaagataaactgaaagtgttgcaggtattg
agtggcgtcaccggtgcagaaggaagatttgattatctcatttcaccaaaggatctcata
cttggtattgttgattatgctcacacacccgatgcgttggaaaatgtgttggcaacgatc
aaaaaattaagaagaggtcatgagcagatcatcaccgttgttggttgcggtggtgataga
gataaaaccaaacgcccggtaatgggtgaagtggcatgtgagctaagcgatagagtgatt
ttcaccagtgacaatccaagaagtgaagacccattagagatactggctgatatggaattt
ggattgagtagtgcagcacgaagaaaatttatttcaatagcagatagaaaggaagcgatt
aaaacagcggtgagtcttgctaaacatgaagacatcattcttgttgcaggcaagggtcat
gaaaagtaccaggatattaaaggcgtaaagtatgagtttgatgataagaaggtgctggaa
caaatgtttgaattattagagagatga
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