Lacibacter sediminis: H4075_17815
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Entry
H4075_17815 CDS
T06746
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lacs
Lacibacter sediminis
Pathway
lacs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H4075_17815 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lacs03400
]
H4075_17815 (nth)
Enzymes [BR:
lacs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H4075_17815 (nth)
DNA repair and recombination proteins [BR:
lacs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H4075_17815 (nth)
Prokaryotic type
H4075_17815 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
HHH_8
DUF2400
DpnD_N
Motif
Other DBs
NCBI-ProteinID:
QNA43910
UniProt:
A0A7G5XEK7
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All DBs
Position
4184779..4185423
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AA seq
214 aa
AA seq
DB search
MTTKERYQSVIDYFSVHAPDAETELLYDNPFQLLVAVILSAQCTDKRVNLTTPAIFEKYP
DAKSMSKATFDELFPLIKSISYPNNKTKHLIGMAQKLVNEFNSEVPLTVDELVKLPGVGR
KTANVITSVVDSQPNMAVDTHVFRVSKRIGLVKQTATTPLAVEKELIKHFPTELIHKAHH
WLILHGRYICVARTPKCRECGLQHCCKYFEKNNR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaaagagcgttaccaatccgttattgattatttttctgttcatgcacccgat
gcagaaacagaattgttgtacgacaatccttttcagctgttggttgccgttatcctcagt
gcccaatgcaccgataaacgggtgaacctaaccactcctgccatcttcgagaaatatcct
gatgctaaaagcatgagcaaggccacgttcgatgaattgtttccactcattaaaagcatt
tcatatcccaacaataaaaccaaacatctgattggtatggcacagaaactcgttaacgag
tttaacagcgaagtgccattaactgtggatgaattggttaagctgccgggtgttggacgt
aaaactgccaacgttattacatcggttgtcgattcacaacctaacatggcggttgatacg
cacgtgtttcgtgtaagcaagcgcattggattggtaaagcaaactgcaacaactccatta
gcagtagagaaagaactcatcaaacattttccaacagaacttattcataaagcacatcac
tggcttattttacacggtcgttatatttgtgttgcacgcacgccgaaatgcagggaatgc
ggattgcagcattgctgtaaatattttgagaagaataaccgctga
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