Lachnoclostridium sp. YL32: A4V08_06425
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Entry
A4V08_06425 CDS
T04430
Name
(GenBank) DNA-binding response regulator
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy01502
Vancomycin resistance
lacy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A4V08_06425
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
A4V08_06425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lacy02022
]
A4V08_06425
01504 Antimicrobial resistance genes [BR:
lacy01504
]
A4V08_06425
Two-component system [BR:
lacy02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
A4V08_06425
Antimicrobial resistance genes [BR:
lacy01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
A4V08_06425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
GerE
GlnR_1st
Motif
Other DBs
NCBI-ProteinID:
ANU45512
LinkDB
All DBs
Position
complement(1508529..1509236)
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AA seq
235 aa
AA seq
DB search
MNEKILVVDDEKEIADLIEVYLQNENMDVYKFYSGEEALSCIKSTDFDLAILDIMLPDIS
GLSICQMIRSKEYKYPVIMLTAKDGETDKITGLTLGADDYITKPFLPLELIARIKAQLRR
YKKYNVNSVAPAAEKVLRHAGLVMKLKTYECWLDEKSLALTPTEFTILKVLLEHKGSVVR
SEELFHEIWQEEYYSKSNNTITVHIRHLREKMKDTGESPRYIKTVWGIGYKIGEI
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgaaaaaatactggttgtagatgatgagaaagaaatagcggatctgatcgaagta
tatttacaaaatgaaaacatggacgtatataaattctactctggtgaggaagctctttcc
tgtatcaagagtacggattttgatttggcaatattggatattatgcttccggatatcagc
ggcctttccatctgccagatgatacggagtaaggaatataaatatccggtaatcatgctg
acggcaaaggatggagagacagataaaatcaccggacttacactgggggcagatgattat
atcacaaaaccgtttcttccgctggaactgatagcgagaataaaagcccagcttaggcgg
tataagaaatataatgtaaattccgttgctccggcagcagagaaggttcttagacatgcc
ggactggttatgaagcttaaaacatatgagtgctggcttgatgaaaaaagtctggcgctt
actcctacggaatttacgatactaaaggttcttttagagcataagggcagtgtagtccgc
tctgaggaattatttcatgaaatatggcaggaagagtattacagcaagagcaataataca
attacagtacacattcgtcatcttcgtgagaaaatgaaggatactggtgaaagccccaga
tatataaaaacagtgtgggggattggatataaaattggagagatataa
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