Legionella adelaidensis: NCTC12735_01972
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Entry
NCTC12735_01972 CDS
T07063
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ladl
Legionella adelaidensis
Pathway
ladl03030
DNA replication
ladl03410
Base excision repair
ladl03420
Nucleotide excision repair
ladl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ladl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12735_01972 (ligA)
03410 Base excision repair
NCTC12735_01972 (ligA)
03420 Nucleotide excision repair
NCTC12735_01972 (ligA)
03430 Mismatch repair
NCTC12735_01972 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ladl03032
]
NCTC12735_01972 (ligA)
03400 DNA repair and recombination proteins [BR:
ladl03400
]
NCTC12735_01972 (ligA)
Enzymes [BR:
ladl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NCTC12735_01972 (ligA)
DNA replication proteins [BR:
ladl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC12735_01972 (ligA)
DNA repair and recombination proteins [BR:
ladl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NCTC12735_01972 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12735_01972 (ligA)
MMR (mismatch excision repair)
DNA ligase
NCTC12735_01972 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC12735_01972 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH
PTCB-BRCT
RNA_pol_A_CTD
UPF0758_N
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
VEH86322
UniProt:
A0A0W0R4Q1
LinkDB
All DBs
Position
p29:complement(57938..59953)
Genome browser
AA seq
671 aa
AA seq
DB search
MAEDISNKLKELKDKIRLYDYHYYVKDEPLVPDIEYDRCFMQLRELEEQYPELISPDSPT
QRVGIAPVASLEPIAHHQPMLSLGNVFTESELKAFLKRVADKLALQEEELVFVGEPKLDG
LAVNLTYEQGNLISAATRGDGAVGENITSNIKTIEAVPLTLLGESIPPFIEIRGEVYIPK
KEFELFNEKARQLGERTFANPRNAAAGSLRQLNPAITAQRPLAIYFYGIGECRGMKLPAT
HWGQLKLLRNFGFRVSSEAQIVKGFNGCMEFYLSILAKRESLPFEIDGVVYKLNNIAQQK
ELGFVSRAPRFACAHKFPASEEMTVLLDVDFQVGRTGALTPVARLNPVSVSGVTVCNATL
HNIDEIIRKDIRIGDTVVVRRAGDVIPEVVSVVMEKRPSITQTIHLPSHCPVCGAQVERE
EGEAISRCTGGLFCKAQLKRSIWHFASRRAMDIDGLGGVLIDQLVDLNLINDVADLYSLS
LEQLASLPRMGKKSAENLINALEKSKETTFARFLYALGIREIGESSAHLLATHFPTLETL
QNASVEELMNIKDIGPVAAEHVVFFFAEEHNLHVIDKLLNAGIHWPEKMKLALDHAHPFF
GKILVLTGGLSSMSRDEAKERLIHLGAKVSGSVSSKTDFVVAGVDPGSKYDKARELGVVI
LDEQQFLELLG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatatatcgaataaattaaaagaattaaaagataaaattcgtctgtatgat
taccattattacgtaaaagatgaacccctggttccggatattgaatatgaccgctgtttt
atgcaattgcgagaattagaagagcaatatcctgaattgatttcaccagactctcctact
caacgggtgggtattgctcctgtggcctcgctagaacccattgcacaccatcaaccaatg
ctttctttagggaacgtattcactgaaagcgaactaaaagcatttttaaaaagggtggct
gataagcttgcgctgcaagaagaggaattggtttttgttggtgaaccaaagttggatggt
ttggccgttaatcttacttatgagcaaggaaatttaatctccgctgccacccgtggagat
ggtgctgtgggtgaaaatattaccagtaacattaaaacaattgaggcagttcctttaacc
ttgttgggcgaaagtattcccccttttatagaaattcgtggagaagtttacatacccaaa
aaagaatttgaattatttaatgaaaaggcgcgtcaattaggtgaaagaacatttgccaat
ccaaggaacgcagccgcaggtagcttgcggcaattaaatcctgctattactgcacaaagg
ccattagctatttatttttatgggattggagaatgccggggaatgaagttgcctgccaca
cattgggggcagcttaaattattacgcaattttggcttcagagtgtcttcggaggctcaa
attgttaaaggatttaatggctgtatggagttttacctaagtattttagctaaaagagaa
agtttaccctttgaaattgatggtgtagtttataaactcaataatattgcccaacaaaaa
gaattaggctttgtttctagagcccctcgttttgcttgcgcacataaatttcctgccagt
gaagaaatgacggttttattggatgttgattttcaagtaggaagaactggggccttaact
ccggttgccaggctgaatcctgtgagtgtttcaggagttacggtatgtaacgctacttta
cacaatatagatgaaataattcgtaaagatattcgtattggcgacactgtggtagtacgt
cgagctggggatgttattcctgaggttgttagtgtcgttatggaaaaacgccccagtata
actcaaacaattcatctgccatcgcattgtcctgtttgtggagcccaggtagagcgtgaa
gaaggagaggcgatttcacgatgcacggggggattattttgtaaagcccaattaaaacga
agcatttggcactttgcgtcaaggcgggcaatggatattgatggacttggcggggtgcta
atagatcagttagttgatttgaatttaattaatgacgtagctgatctctattccctttca
ttggaacaattggctagcttgcctcgaatgggaaaaaaatcagctgagaatttaattaat
gctttagagaaaagcaaagagaccacgtttgctcgttttttatatgcgctaggtattcga
gaaattggcgagtcgagtgcccatttattggctactcatttcccaacgttagagacatta
caaaatgcttccgttgaagaattaatgaatataaaagatatagggcctgttgctgctgag
catgtagtctttttctttgctgaagaacataatttacatgtaatagacaagttgctgaat
gcggggatacattggcccgaaaaaatgaaactggcattggatcacgcgcatccttttttt
ggaaaaatattggttttaacgggtggtttaagtagtatgagtagggatgaggccaaagaa
cggcttattcatcttggggcgaaagtttctggcagcgtaagtagcaagactgactttgtg
gtggcgggagttgatcccggctctaaatatgataaggcgcgcgagttaggagttgttatt
ttggatgaacagcaattcttagagttgttaggttga
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integrated database retrieval system
