Lactobacillus acetotolerans: LBAT_1309
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Entry
LBAT_1309 CDS
T03976
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lae
Lactobacillus acetotolerans
Pathway
lae03030
DNA replication
lae03410
Base excision repair
lae03420
Nucleotide excision repair
lae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBAT_1309
03410 Base excision repair
LBAT_1309
03420 Nucleotide excision repair
LBAT_1309
03430 Mismatch repair
LBAT_1309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lae03032
]
LBAT_1309
03400 DNA repair and recombination proteins [BR:
lae03400
]
LBAT_1309
Enzymes [BR:
lae01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
LBAT_1309
DNA replication proteins [BR:
lae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LBAT_1309
DNA repair and recombination proteins [BR:
lae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
LBAT_1309
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBAT_1309
MMR (mismatch excision repair)
DNA ligase
LBAT_1309
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LBAT_1309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
Zn_ribbon_NUD
RNA_pol_A_CTD
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
BAQ57698
UniProt:
A0A0D6A4H4
LinkDB
All DBs
Position
complement(1350188..1352194)
Genome browser
AA seq
668 aa
AA seq
DB search
MANLTLAEAKKEIGPLRKQLNEWADAYYSKDAPKVEDNVYDKKYNRLVELETQFPQLITP
DSITQKVGGQIDSEFTKVAHPIPMLSMGDVFSKGELREFDQRIQKLVGHPVAYNVELKID
GLSISLEYTNGRLVRASTRGNGEVGEDVTKNARYIKDIPQTLPEPLTTEVRGECYMDKEA
FAKLNKERDEKGKSVFANPRNAAAGSLRQLDARITKRRDLSTFIYTWVNPPEKITGQHQA
IDEMHRLGFHTNQTGQKLSNLDDIFAFIDKYTAKRDSLTYGIDGIVLKVDDLSIEQSLGN
TVKVPRWEIAYKFPPEEQETVVHDIKWTVGRTGVVTPTAVMDPVKLAGTTVSRAVLHNPD
LLKEKDVRIGDTVKLHKAGDIIPEISEVVLSKRPKDSVPYKIPTTCPSCGQKLVHLEGEV
ALRCINPSCPAQVEEQITHFASRPAMDIDGLGPKIVRQLISNNLVHNVADLYHLTADDLS
KLDHFKDKSINNLLTAINNSKSNSVELLLTGLGIDHVGAKAARLIARKFKNMEKIMNADV
QEVASIATIGMTIAESLTTYFAQPEVIKLVEELKESGLNMDYLGEDEPEEIKDNYFKDKT
VVLTGTLEHYTRSEFSKKLQSLGAKVTGSVSHNTDYVIYGKNAGSKYTKAGNLGVPRLTE
EEAIAHIE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatttaactcttgcggaagcaaaaaaagaaattggtcctcttaggaaacagctt
aatgagtgggctgatgcctattattcaaaagatgcgcccaaggttgaggataatgtttat
gataagaaatataaccgtcttgttgaactagaaacgcaatttccgcaacttataacaccc
gattcgatcacacaaaaagttggtgggcagattgattctgagtttaccaaagttgcacac
ccaattcctatgctttcaatgggagatgttttttctaaaggtgagctgcgagaatttgac
caaagaattcaaaaattagtcggtcatccggtagcttacaatgtagaattaaaaattgat
ggtttatctatctctcttgaatacaccaatggccgattagttcgtgcctctacacgtgga
aatggtgaagtcggtgaagatgtaacaaaaaatgcccgttacattaaggatatcccgcaa
accttgcctgaaccgttgactaccgaagtacggggcgaatgttatatggacaaagaagca
tttgctaagttgaataaagagcgggacgaaaaaggtaaaagtgtttttgccaatcctcgt
aatgctgctgctggttcattgcggcaacttgatgctcgtattactaagagacgggattta
agtacctttatttatacctgggttaatccgcctgaaaaaattacgggtcagcaccaagca
attgatgagatgcaccgcttaggttttcatacgaaccaaacggggcaaaaattatctaat
ttggatgatatttttgcttttatcgataaatatacagccaaacgtgatagtttaacctac
ggaatcgatggaattgtacttaaggttgatgatttaagtattgaacagagcctaggtaat
accgttaaggtaccacgttgggaaattgcttataagtttccacctgaggaacaggaaacg
gttgtccatgatattaaatggacggtcggccgcaccggggttgtaacgccaaccgctgtt
atggacccggtaaaacttgctggtactacggtgtcacgtgcggttctgcataatccggat
ctgcttaaggaaaaagatgtccggattggcgacacggtcaaactgcacaaagcaggcgat
attattccagaaatttctgaagtagtactgtcaaagcggcccaaagattctgtcccgtat
aaaattccaactacttgtccgtcatgtggtcaaaaattggtgcacttagagggtgaagtt
gctcttcgttgtattaatccgtcctgtccggcacaagttgaagagcaaataacccacttt
gcatctcgaccagcaatggatattgatggcttgggtcccaagattgttaggcagttaatt
tctaataatttagttcataatgttgctgacttgtaccatttaaccgctgatgatttatcc
aagttagatcactttaaagataaatcaattaataacttattaactgcaattaataattct
aagtcgaattcagttgaattgcttttgactggtttgggaatagatcacgttggagctaag
gctgcccgcttaattgcgcgaaagtttaaaaatatggaaaagattatgaatgcggacgtg
caagaagttgcttcaatcgctacaataggcatgacgattgctgaatctttaactacttat
tttgctcaaccagaggttattaaactggtggaagagctaaaagaaagtggtttgaacatg
gattacctcggtgaagatgaacctgaagaaattaaagataattactttaaagataagacg
gttgtgttaactggtacgcttgaacattacactagaagcgagttctcgaagaaattgcag
tctttaggtgccaaggtaacgggctctgtatcacacaataccgattatgttatttatggc
aaaaatgccggttctaagtatactaaagctgggaatttaggtgttccacgtttaactgaa
gaagaagcaattgcacatattgaataa
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