Leptospira tipperaryensis: A0128_01110
Help
Entry
A0128_01110 CDS
T04558
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
laj
Leptospira tipperaryensis
Pathway
laj03030
DNA replication
laj03410
Base excision repair
laj03420
Nucleotide excision repair
laj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
laj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A0128_01110
03410 Base excision repair
A0128_01110
03420 Nucleotide excision repair
A0128_01110
03430 Mismatch repair
A0128_01110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laj03032
]
A0128_01110
03400 DNA repair and recombination proteins [BR:
laj03400
]
A0128_01110
Enzymes [BR:
laj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
A0128_01110
DNA replication proteins [BR:
laj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A0128_01110
DNA repair and recombination proteins [BR:
laj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
A0128_01110
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0128_01110
MMR (mismatch excision repair)
DNA ligase
A0128_01110
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A0128_01110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_2
Nlig-Ia
HHH
MTR4_beta-barrel
Zn_ribbon_PF0610
IBR_2
Motif
Other DBs
NCBI-ProteinID:
AOP32594
UniProt:
A0A1D7USU7
LinkDB
All DBs
Position
1:222658..224703
Genome browser
AA seq
681 aa
AA seq
DB search
MAKKKETVVNSLSEKEAKKEIAKLMEEIRLHQHSYYVKNNATISDFEFDKLFRRLQDLEE
QFPQLKDPASPTLIVGSDLDKDFEKFQHKLPVLSLINTYNDDELLDWVNKTDPEGIYSVE
WKIDGASIVLYYENGMLQNGVTRGSGGVGDDVTDNIRTIRNIPLRLPDSKSVYLRGEVFM
TYKDFEEFNEISSGKYANPRNLAAGSIKQKNSSDTAKRPLRIFAYDATFPNQTKKIKTHQ
EILSQLDQLKFPLAPDTVYVTGSKIAKTIKDFKKKKESLGFPTDGLVIKLNDISKRDALG
YTSHSPRWARAYKFDAVMKESKIVDITYAVGRTGKITPRAEIEPVNLAGTTVTFATLHNQ
DYIDELGVGIGAIVRVAKRGEIIPAVEEVVTPGKDVFKIPDRCPSCKTKTIKKDGLVDLF
CPNSDCPDRVKNGIIFFCQRKQMDIEGLGDKQIEFLYDQDYIRSIADLYDLKDQKEKLME
EEGFGEKSVSIILKGIEDSKQKDFRFVLPSIGLPEIGHKVTELLIEHGVDSIDQILNISK
DADKIEALLEIPGIGPSTVQAFRENFGDKKILKLIERLKKAGLKMKADPIKVADRQPFAG
QSWCVTGSFENFQPRDKAMDLIVYYGGRKVSAVSSKTTHLLAGPGAGSKLEKANELGIAV
YDEKQFLALLKSEGINFKDSI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaaaagagacagtagtcaattctctttccgagaaagaggctaagaaagaa
atagccaagttgatggaagaaatccgccttcatcaacattcttattacgtaaagaataac
gcgacaatttccgactttgaatttgataaactttttcgacgattgcaagatctcgaagaa
caatttccacagttaaaagatccggctagtccaaccttgattgtaggttcggatctggat
aaggattttgaaaaattccaacataaacttcccgttctttcactgattaacacttataac
gacgatgaacttttggattgggtcaataaaaccgatccggagggaatctactccgtagaa
tggaagatcgacggagcttcaattgttctatattatgaaaatggaatgttacaaaacgga
gtcacgaggggttccggcggagtcggagacgacgtaacggataatataagaacgattcga
aatattccgcttcgtttgccggattcaaagagcgtctatttgcgcggggaagtttttatg
acgtataaagacttcgaagaatttaatgagatttcttccggcaaatacgcaaatcctcgc
aacctcgcggcaggatccatcaaacaaaagaattcttccgataccgcgaaacgacctctg
agaattttcgcatacgacgcaacgtttccgaatcaaacgaaaaagataaagacccaccaa
gaaattctttcccaactcgatcagttgaaattccctctggcgcccgatacggtgtacgtg
accggttctaagattgccaagacgatcaaggactttaaaaagaaaaaggaaagcctcggt
tttccgaccgacggcctcgtaatcaagctcaatgatatttcgaaaagagatgcgttgggt
tatacttctcattctccgcgttgggctcgcgcctataaattcgatgccgtgatgaaggaa
agtaagatcgtagatattacgtatgcggtaggtcgtacgggaaagatcacgccaagagcg
gaaatcgaacccgtaaatcttgccggaactacggtaacgtttgccaccttacacaaccaa
gactatatcgacgaactcggagtcgggatcggtgccatagtaagagtcgccaaaagagga
gagatcattcccgcagtggaagaagtcgtaactccgggcaaagacgtttttaagattccc
gatcgttgtccttcctgtaaaacgaaaacgatcaagaaagacggtttggtggatttgttt
tgtccgaactccgattgcccggatcgagtgaagaatggaatcatctttttctgtcaaaga
aaacaaatggatatcgaaggacttggggataaacagatcgagttcttatacgatcaagat
tacattcggtccattgccgatctttacgatctaaaagatcaaaaagaaaaacttatggaa
gaagaaggttttggagaaaagagcgtatcgattattctcaaaggaattgaagattctaaa
caaaaggattttcgattcgtacttccttccatcggccttccggagatcggtcataaggta
actgaacttttgatcgaacacggagtcgattccatcgatcaaatcctaaacatttccaaa
gacgccgataagatagaggcccttttggaaattccgggaatcggtccttctacggttcaa
gcctttcgtgaaaactttggagataagaaaattctaaagttgattgaaaggctgaaaaaa
gccggactgaagatgaaggccgatcccataaaggttgcggatcggcaaccgtttgcggga
caatcttggtgtgtgaccggttcttttgaaaattttcaaccaagagataaggcaatggat
ttgatcgtttattacggtggaagaaaggtgagcgccgtgagttcaaaaacgactcatctt
ttagcgggccccggagccggatctaaattagaaaaagcgaatgaacttggaatcgcagtc
tatgacgaaaaacaattcttggcattactgaaatcggaaggaatcaattttaaggattcg
atttaa
DBGET
integrated database retrieval system
