Lingula anatina: 106168821
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Entry
106168821 CDS
T04921
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
lak
Lingula anatina
Pathway
lak04120
Ubiquitin mediated proteolysis
lak04140
Autophagy - animal
lak04144
Endocytosis
lak04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106168821
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106168821
04140 Autophagy - animal
106168821
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106168821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lak04131
]
106168821
04121 Ubiquitin system [BR:
lak04121
]
106168821
Enzymes [BR:
lak01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106168821
Membrane trafficking [BR:
lak04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
106168821
Ubiquitin system [BR:
lak04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
106168821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-TRAF_2
U-box
TRAF3_RING
zf-rbx1
zf-RING_5
Filament
Tmemb_cc2
Crescentin
PEARLI-4
Cortex-I_coil
DUF1664
BLOC1_2
XhlA
Motif
Other DBs
NCBI-GeneID:
106168821
NCBI-ProteinID:
XP_013403468
UniProt:
A0A1S3IZM8
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MMQLADGVDVTGEFEQNIKLPFTMKTCLVMNSPEKVFSQPTVYHKSNVSECRTGESSGER
AQMMEKGEPQPRTPQGELAEEPLEGYDFDFCPPLDSKYECPICLMCLRDPYQTYCGHRFC
KYCIFKWLREEKHRCPVDNVLLDEQNIYPDNFAKREILGLKLKCPNYSHGCRFIIELCNL
ESHLQSCFYALIPCPQCCPAVLPRKDLKDHIEQSCPRRYVQCDYCFQSIFLSSKQKHLLE
CPFVPTQCKYCDILLTREKLKKHIRTECQKAIVKCRFYEFGCKTEVRRSCIDEHEEQQSQ
QHLWLLCGAVKELYRLLYTIVPQGVSPLPSLGAPASAPPVLTHTDLQLDDQLTSLNLSDD
SSLNALPSSDFTNDLPALKNAILQVRRLIQLHVKPINFNPESTQMMNITKIESDPTAMQS
ARFDSQQNAPPQEHESVLSSVQTKKLQSLQEKTAYQDERMTGQSQQLKETQAKLSSIEKK
LDEYRIRTRQLESQVSEMEARSCNGNFYWVIKNYSRLRREAMSGDNTVLHSPGFYTSFHG
YKLCVRLNLNGVDSAHGTHLSLFIHFMQGEFDSFLEWPFGGRITLTIMDQNEACELRQHI
TETLIAKPHLAAFQKPRAHRNHKGFGYMEFAPLSLIENSQYVKNDSLIIHAQVVAQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagttagctgacggcgtcgatgtaacaggggaatttgagcaaaatattaaacta
ccttttacaatgaagacttgtttagtcatgaatagtccagaaaaagttttttctcaacca
acggtgtatcataaatccaatgttagcgagtgcagaacaggggagtcttctggggagaga
gcccaaatgatggagaaaggagagcctcaaccaagaacccctcaaggagaacttgcagag
gaaccattggaaggatatgactttgacttctgcccaccactagattccaagtatgaatgc
cccatctgcctcatgtgtctgagggacccctatcaaacctactgtggacatcgcttctgt
aaatattgtatatttaaatggctcagggaagaaaaacacagatgcccagtggataatgtt
ttgttagatgagcaaaatatctatccagataattttgccaaaagggaaatccttggctta
aaactaaagtgtccaaattatagtcatggatgtaggttcattattgaactgtgtaatctg
gagagtcacttacagtcctgtttttatgcccttataccatgtccacaatgctgtccagca
gttctgcctagaaaggacctcaaagatcacattgaacaaagctgcccacggcgctacgtc
cagtgtgattactgctttcaaagtatatttctaagttcaaagcagaaacatctcttggaa
tgtccatttgtgccaactcagtgcaaatactgtgatatactccttaccagggaaaagcta
aaaaagcatatcagaacagagtgtcaaaaagcaatagtaaagtgtcgattctatgagttt
ggatgcaaaacagaggtgaggcgatcatgtatagatgaacatgaagaacaacagagccaa
cagcatctttggttactatgtggtgcagtgaaggagttgtaccgtctgctttacaccata
gttccccagggagtatcgccactacctagtttaggggcacctgcctctgccccacctgtt
ttaacacatactgaccttcagctagatgaccagctgaccagtctgaatttaagtgatgat
agtagcctcaatgctctcccttcctcggattttacaaatgatctacctgcactgaaaaat
gcaattttgcaagttagaagacttatacaacttcatgtaaaacctatcaatttcaatcct
gagagtactcagatgatgaacatcaccaaaattgagagtgatcctactgcaatgcaatca
gcaagattcgattcccaacagaatgctccaccacaggaacatgaatctgtactttcatca
gttcagaccaaaaagttacaatcattgcaagagaagactgcctatcaagatgagagaatg
accggtcagagtcaacagttaaaagaaacccaagccaaactgtccagtatagaaaaaaaa
ttagatgagtatagaatcaggactcgacagctggagagtcaagtcagtgaaatggaagcc
agaagttgtaatggaaatttttactgggtgattaagaattattctagattaagaagagaa
gcaatgtctggtgataatacagtacttcacagtccagggttttatacaagttttcatggg
tataaattgtgtgtgcgtctcaatttgaatggggtagattctgctcatggaacacatctt
tcactgttcatccactttatgcagggagagtttgatagttttctggagtggccatttggt
ggaagaataacactgaccattatggatcagaatgaagcatgtgaattaagacaacacata
acagaaacattaattgcaaaacctcatttagctgcttttcaaaaacctcgtgcacatcga
aatcacaagggatttggttacatggagtttgcaccattgagtcttattgaaaattcacag
tatgtgaagaatgattctctgatcattcatgcacaagtagttgcccaataa
DBGET
integrated database retrieval system
