Lingula anatina: 106180025
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Entry
106180025 CDS
T04921
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lak
Lingula anatina
Pathway
lak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106180025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lak03041
]
106180025
Spliceosome [BR:
lak03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106180025
Complex C
U5 SnRNP specific factors
106180025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Motif
Other DBs
NCBI-GeneID:
106180025
NCBI-ProteinID:
XP_013419342
UniProt:
A0A1S3KA13
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDADLYDEFGNYIGPDLESDDDEDEEEQQEDEEEEADEEEMDMDRDDDQDINDMQVVLHE
DKKYYPTPEEVYGPEVETIVHEEDTQPLTEPIIAPVKRTKFQVAEQELPETTYNIEFLAD
LMDNPDLIRNVALCGHLHHGKTSFVDSLVEQTHPEMEIEEGKDLRYTDILFTEQERGLSI
KSLPVSLLLQDTRTKSYLVNVFDTPGHVNFSDEVTAAFRMCDGAVIFIDAAEGVMLNTER
LIKHALQEKLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISTFADEEEDMSV
SPLKGNVCFASSYYRFCFTLSSFAKIYSDTYGGINTYEFARRLWGDIYFNSKTRKFSKKP
ANSTSQRSFVEFILEPLYKIFSMTVGDVDLNLPQVCEELGISLTKEERKLNIRPLLRIVL
RRFFGDFSGFVDMCVQHVPSPGDHAKSKVEHTYTGPLDTELADSMTQCDPDGPLMIHTTK
LYPTEDATAFHVLGRVMSGTLYANQDVKILGENYSLQDEEDSRFGQVGRLWIYEARYKIE
VNRVPAGNWVLIEGIDQPIVKTSTITEATGNEEAFIFRPLKFNTSSVIKIAVEPVNPSEL
PKMLDGLRKISKSYPLVTTKVEESGEHIVLGTGELYLDCVMHDLRKLYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWPRKRLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKGLLNSVKDSIVQGFQWGTREGPLC
DEPIRNVKFKILDAVIAQEPIHRGGGQIIPTARRVAYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSV
FHHWQIVPGDPLDKSIIIRPLEPQPATALAREFMIKTRRRKGLSEDVSINKFFDDPMLLE
LAKQDVMLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagatctctatgatgagtttgggaactacatcggacctgatttggaaagtgac
gatgatgaggatgaagaagaacagcaggaagatgaggaagaggaggcagatgaggaggag
atggacatggaccgcgatgatgaccaagacatcaatgacatgcaggtggtactacacgaa
gacaagaaatactaccccacacctgaggaggtatatggaccagaggtagagacaatagtt
catgaggaggacacccagcccctgacggagcccattattgcccctgtcaagaggacaaag
ttccaagttgcagaacaagaactgccagaaacaacttataacatagagtttttagcagac
ttgatggacaacccagaccttatcaggaatgtggcactgtgtggtcatctccaccatgga
aagacatcatttgtggacagtttggtggagcagacacacccggagatggaaatagaggaa
gggaaagatcttaggtacacagatattttgtttacagaacaagagagaggtctaagcatc
aaatcactccctgtgagtctcttgctacaagacaccaggacaaagtcatacctcgtcaac
gtgtttgacacaccaggacatgtcaacttctctgatgaggtgacagccgcgttcaggatg
tgtgacggtgctgttatctttattgatgctgcagagggggtgatgttgaacacagaacgc
ctcatcaagcatgccctccaggagaagctagcagtcacagtgtgtattaacaagatagac
agattgatactggagctcaagctgccgcccactgatgcttattataaactgagacacatc
gtggatgaagtcaatggcctgataagcacgtttgcagatgaggaagaagacatgtcggtc
tcccctctgaagggcaatgtctgttttgccagttcgtactacaggttttgcttcactctc
agctccttcgctaagatatactctgatacgtacggtggtattaacacatacgagtttgcc
aggagactgtggggagatatctacttcaacagcaaaacgaggaaattttcaaagaagcct
gccaacagcacatcccagagaagttttgtggagtttatattagaaccactgtacaagata
ttttctatgactgtgggggacgtggacctgaacctgccgcaggtgtgtgaggagctgggc
atcagtctcaccaaggaggagaggaaactgaacatacggccccttctcaggattgtactg
aggaggttctttggggacttctcaggcttcgttgacatgtgcgtgcagcacgtgccctcc
cctggggaccacgccaagtccaaagtagagcacacatacacagggcctctggacacggag
ctggcagactccatgacacagtgtgatcctgatggtcctcttatgatccataccacaaag
ctttaccccacagaagatgctacagcatttcacgtgcttggtcgcgtgatgagtggcacg
ctgtatgcgaaccaagatgtcaaaatcctcggggagaattactcattacaggatgaagaa
gactccaggtttggtcaggtgggaagactgtggatatatgaggccagatacaagatagag
gtgaaccgtgtgccagcaggtaattgggtgttaatagagggcatagatcagcccatagtg
aagacttctactataacagaggccacagggaatgaagaggccttcatcttcagacctctg
aagttcaacacaagttctgtgatcaagatagccgtagagccggtcaatccatcagagctc
cccaagatgttggacggactgaggaaaattagtaaaagttaccctcttgtaacaacaaag
gtagaagagtcaggagagcacatagtgttggggacaggggagctgtatctggactgtgtg
atgcatgatctcagaaagctgtattcagaaatagacattaaggtagctgacccagtagta
actttttgtgagacagtggtggagacttcctccctcaaatgttttgctgaaacacccaat
aaaaaaaataaaatcacaatgattgctgagccgttggagaagggattggctgaggacatt
gaaaatgaggtcgtacagatcacatggcccagaaagaggcttggggaatttttccagacg
aagtatgactgggatttgctggctgctcgttccatttgggcatttggtcctgacgcaact
ggacccaatattctggtagatgatactcttccctcagaggtggacaaaggtctcttgaac
tctgtgaaagatagtattgtccaaggtttccaatggggcacgagggaaggacctctctgt
gatgaacctatccgaaatgtgaagtttaagatcttggatgcagtgatagcccaggaaccg
atccacaggggaggtggacagattattccaacagccaggagagtggcatactctgctttc
ctaatggccacaccccgtctgatggagccatattactttgtggaggttcaggcccctgct
gactgtgtgtctgcagtgtatactgtactggctaggagaaggggtcatgtgactcaagac
gctccaatcccaggctcaccactgtacacaatcaaagctttcattcctgccatagattcc
tttgggtttgagacagacttgaggacccacacacagggacaggctttctgtctgtctgta
ttccatcactggcagattgtacctggagaccccttggacaagagtatcataattcgtccc
ctggagccccagcctgccactgctctggccagggaattcatgatcaaaaccaggagaaga
aagggtcttagtgaagatgtcagcatcaacaaatttttcgacgaccctatgttgttggag
ttggcaaaacaggacgtgatgttgaactatcccatgtag
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