Lagenorhynchus albirostris (white-beaked dolphin): 132511317
Help
Entry
132511317 CDS
T10760
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lalb04040
]
132511317 (SCN4A)
Ion channels [BR:
lalb04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
132511317 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
132511317
NCBI-ProteinID:
XP_059990402
LinkDB
All DBs
Position
20:complement(45656680..45702791)
Genome browser
AA seq
1814 aa
AA seq
DB search
MATSSLPTVVPLGPESLRPFTRESQAAIERRVMEEEARQQRNKQMEIEEPEQKPCSDLEA
GKSLPLIYGDPPPEVIGIPLEELDPYYSDKKTFIVLNKGKAIFRFSATPALYVLSPFSTL
RRYAIKVLIHSLFSMFIMITILTNCVFMTMSDPPSWSKHVEYTFTGIYTFESLIKILARG
FCIEDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYGNDTW
DGQESWASNSTFDWDAYINDEGNFYFLEGSNDALLCGNSSDAGRCPEGYECIKAGRNPNY
GYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILA
VVAMAYAEQNEATLAENQEKEEEFQQMLEKFKKQQEEAKAAQTLEGREADEDPAHGKDCN
GSLDTSAGEKGPPRPSCSADSGISDAMEELEEAHQKCPPWWYKCSQKVLIWNCCTPWMKF
KNIVHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEQFDRVLNVGNLVFTGIFTAEMVL
KLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLN
MLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIAADCNLPRWHMHDF
FHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNLFLALLLSSFSA
DSLAASDEDGEMNNLQIAVTRIKWGVGFAKAFLVGLLHGKILSPKVIMLSLGGTGEAGEA
GEAGESVSEDEKKELPPEEDENKDLKKDNHILNHMGLADGPPPSIELDHLNFINNPYLTI
HVPIASEESDLEMPTEEETDTFSEPEDGKKPLQPLDGNSSVCSTADYKPPEEDPEEQAEE
SPEGEQPEECFTEACVQRFPCLYVDISQGRGKMWWTLRRACFKIVEHNWFETFIVFMILL
SSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIVEMLLKWVAYGFKVYFTNAWCWLDFL
IVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNV
LLVCLIFWLIFSIMGVNLFAGKFYYCMNTTTSERFDISEVNNKSECESLMHTGQVRWLNV
KVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPQYEVNIYMYLYFVIFIIFGS
FFTLNLFIGVIIDNFNQQKKKFGGKDLFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQ
GMVYDLVTQQAFDITIMILICLNMVTMMVETDDQSQLKVDILYNVNMVFIIIFTGECMLK
MLALRQYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIR
GAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDMFNFETFG
NSIICLFEITTSAGWDGLLNPILNSGPPDCDPALENPGTSVRGDCGNPSIGICFFCSYII
ISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQFIDYSRLSDF
VDTLQEPLRLAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALKETMEE
KFMAANPSKVSYEPITTTLKRKHEEVCAVKIQRAYRRHLLQRSVKQASYMYRHSQDSSGD
AAPEKEGLIADTMNKMYGPENGNSGLQSKGEWRGSTWDPRPALGLLSIRPTDTALPPAPP
PGQTVRPGVKESLV
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcatctctgcccacggtggtgcctctgggccctgagagcctgcgccccttc
acccgggagtcccaggcagccatagaacggcgggtgatggaggaggaggcccggcagcag
cggaacaagcagatggagatcgaggagcccgaacagaagccgtgcagtgacctggaggct
ggcaagagcctgcccctcatctatggggaccccccgccggaggtcattggcatccccctg
gaggagctggatccctactacagcgacaagaagaccttcatcgtgctcaacaagggcaag
gccatcttccgcttctccgccacccctgctctctacgtgctgagccccttcagcaccctc
agacgctacgccatcaaggtgctcatccactcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgcgtgttcatgaccatgagcgacccgccttcctggtctaagcatgtg
gagtacaccttcacagggatctacacctttgagtccctcatcaagatcctggcccgcggc
ttctgcatcgaagacttcacattcctccgggacccctggaactggctggacttcagcgtc
atcatgatggcgtacctgacggagtttgtggacttgggcaacatctcagccctgagaacc
ttccgggtgctgcgggccctgaaaaccatcacagtcatcccagggctgaagaccatcgtg
ggagccctgatccagtcggtgaaaaagctgtcagatgtgatgatactcaccgtcttctgc
ctgagtgtctttgccctggtggggctgcagctcttcatgggaaacctgcggcagaagtgt
gtgcgctggcccccgcccttcaatgacaccaacaccacgtggtacggcaatgacacctgg
gacggccaggagagctgggccagcaactctacctttgactgggatgcctacatcaatgac
gaagggaacttctatttcctggaaggctccaatgacgccctgctctgtgggaacagcagc
gatgctgggcgctgccctgagggttacgagtgcatcaaggctgggcggaaccccaactat
ggctacaccagctatgacaccttcagctgggccttcctggctctcttccgcctcatgaca
caggactattgggagaacctcttccagctgacccttcgggcagccggcaagacctacatg
atcttcttcgtggtcatcattttcctgggctccttctacctcatcaacctgatcctggcg
gtggtggccatggcatatgctgagcagaacgaggccaccttggccgagaatcaggagaaa
gaagaagagtttcagcagatgctggagaaattcaaaaagcagcaggaagaggccaaggcc
gctcagacgctggaaggtagggaggcagacgaggacccagcccacggcaaagactgcaac
ggcagcctggacacatcggcgggggagaaggggcccccaagacccagctgcagcgcagac
agcggcatctcagatgctatggaagagctggaagaggcccaccagaagtgcccaccatgg
tggtacaagtgttcccagaaagtgctcatatggaactgctgcaccccgtggatgaagttc
aagaacatcgtccacttgattgtcatggaccccttcgtggacctgggcatcaccatctgc
attgtgctcaacaccctcttcatggccatggagcattaccccatgacggagcaatttgac
agagtgctcaacgtgggcaacctggtcttcacgggcatcttcacagcagagatggtgctg
aagctcatcgccatggacccctacgagtacttccagcagggctggaacatcttcgacagt
atcatcgtcaccctcagcctggtggagctgggcctggccaatgtgcaggggctgtcggtg
ctccgctccttccgtctgctgcgggtcttcaagctggccaagtcgtggccaacgctgaac
atgctcatcaagatcatcgggaactcggtgggggcgctgggcaacctgacgctggtgctg
gccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttcggcaagagctacaag
gagtgcgtgtgcaagatcgccgcggactgcaacctgccccgttggcacatgcacgacttc
ttccactccttcctcatcgtcttccgcatcctgtgcggggagtggatcgagaccatgtgg
gactgcatggaggtggccggccaggccatgtgcctcaccgtcttcctcatggtcatggtc
atcggcaacctggtggtcctgaacctcttcttggccctgctgctcagctccttcagcgcc
gacagcctggcggcctcggacgaggatggcgagatgaacaacctgcagatcgccgtcacg
cgcatcaagtggggtgtcggcttcgccaaagccttcctcgtggggctgctgcatggcaag
atcctgagccccaaggttatcatgctcagcctcggggggactggggaggctggcgaggcc
ggcgaggctggggaaagtgtctcagaagacgagaagaaggagctaccgcccgaggaggat
gaaaacaaggacctcaagaaggacaatcatatcctgaaccacatgggcctggctgacggc
cctccccccagcattgagctggaccacctcaacttcatcaacaacccctacctgaccatc
cacgtgcccatcgcctccgaggagtctgacctggagatgcccacagaggaggaaacggac
accttctcagagcctgaggatggcaagaagccgctgcagcccctcgatgggaactcctcc
gtctgcagcactgccgactacaagccccccgaggaggaccccgaggaacaggccgaggag
agccctgagggggagcagcccgaggagtgcttcaccgaggcctgtgtgcagcgctttccc
tgcctctacgtggacatctcccagggccgagggaagatgtggtggaccctgcgcagggcc
tgcttcaagatcgttgagcacaactggtttgagaccttcatcgtcttcatgatcctactc
agcagtggcgccttggccttcgaggacatctacatcgagcagcggcgagtcatccggacc
atcctggaatacgccgacaaggtcttcacctacatcttcatcgtggagatgctgctcaag
tgggtggcctacggcttcaaggtgtactttaccaacgcctggtgctggctcgacttcctc
atcgtggatgtctccatcatcagcctggtggccaactggctgggctactcggagctggga
cccatcaaatccctgcgaacactcagggctctgcgtcccctgagggcactgtctagattc
gagggcatgagggtggtggtgaatgccctcctgggagccatcccctccatcatgaatgtg
ctgctcgtctgcctcatcttctggctcatcttcagcatcatgggcgtcaacctgtttgcc
ggcaagttctactactgcatgaacaccaccacctccgagaggttcgacatctccgaggtc
aacaacaagtccgagtgcgagagcctgatgcacacgggccaggtccgctggcttaacgtc
aaggtcaactatgacaacgtgggtctgggctacctctccctcctgcaggtggccaccttc
aagggctggatggacatcatgtatgcagccgtggactcccgggagaaggaggaacagccc
cagtacgaggtgaacatctacatgtacctctatttcgtcatcttcatcatcttcggctcc
ttcttcaccctcaacctcttcattggcgtcatcatcgacaacttcaaccagcagaagaag
aagtttggagggaaagacctcttcatgacggaggaacagaagaaatactataacgccatg
aagaagcttggctccaagaagcctcagaagccaattccccggccccagaacaagatccag
ggcatggtgtacgacttggtgacgcagcaggcgttcgacatcacgattatgatcctcatc
tgcctcaacatggtcaccatgatggtggagacggatgaccagagccagctcaaagtggac
atcctctacaacgtcaacatggtcttcatcatcatcttcacgggcgagtgcatgctcaag
atgctggccctgcgccagtactacttcaccatcggctggaacatcttcgactttgtggtc
gtcatcctgtccattgtgggcctcgcactctctgacctgatccagaaatacttcgtgtca
cccacgctgttccgtgtcatccgcctggcgcggattgggcgcgtcctacggctgatccga
ggggccaagggcatcaggacgctgctctttgctctcatgatgtcactgcccgccctcttc
aacatcggcctcctcctcttcctggtcatgttcatctactccatcttcggcatgtccaac
ttcgcttacgtcaagaaggagtcgggcatcgacgacatgtttaactttgagaccttcggc
aacagtatcatctgcctctttgagatcaccacgtcagccggctgggacgggcttctcaac
cccatcctcaacagcgggccccccgactgtgaccccgcgctggagaacccgggcaccagc
gtcaggggcgactgcggcaacccctccatcggcatctgcttcttctgcagctacatcatc
atctccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttcaacgtg
gccacggaggagagcagtgagcctctcggggaggatgacttcgagatgttctacgagacg
tgggagaagtttgaccccgacgccacgcagttcatcgactacagccgcctctccgacttc
gtggacaccctgcaggagccgctgaggctcgccaagcccaacaagatcaagctcatcaca
ctggacctgcccatggtgccaggggacaagatccactgcctggacatcctctttgccctg
accaaagaggtcctgggagactctggggagatggatgccctcaaggagaccatggaggag
aagttcatggctgccaacccatccaaggtctcctacgagcccatcacaaccaccctcaag
aggaagcacgaggaagtgtgcgccgtcaagatccagagggcctaccgccggcacctgctg
cagcgctccgtgaagcaggcttcctacatgtaccgccacagtcaggacagcagcggggac
gcagcacccgagaaggaggggctgattgctgacaccatgaacaagatgtatggccctgag
aacgggaacagcggtttgcagagcaagggggagtggaggggctcgacatgggaccccaga
cctgccctggggctcctgtccatcagacccacagacacagccctccctcctgccccaccc
ccggggcagacggtgcgcccaggggtcaaagagtctcttgtctag
DBGET
integrated database retrieval system
