Lagenorhynchus albirostris (white-beaked dolphin): 132512015
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Entry
132512015 CDS
T10760
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132512015 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lalb03041
]
132512015 (EFTUD2)
Spliceosome [BR:
lalb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
132512015 (EFTUD2)
Complex C
U5 SnRNP specific factors
132512015 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
132512015
NCBI-ProteinID:
XP_059991947
LinkDB
All DBs
Position
20:complement(42662480..42695605)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEVDDDDDDDELGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattatattggaccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgaggtcgatgatgatgat
gatgacgacgagctgggagatcatgatgaagaccaccctgggatggaggtggtgctgcat
gaggacaagaagtactaccccacagctgaggaggtatatggtcctgaagtggagaccata
gttcaggaggaggacacccagcctctcacagaacccattattaaaccggtgaaaaccaag
aaattcactctgatggagcagacattacctgtcacggtatatgaaatggatttcttggca
gatctgatggataactcggagctgatcagaaatgtgaccctttgtggtcatctccaccat
ggcaagacatgttttgtagattgtttaatagagcagactcacccggaaatcagaaagcgc
tacgaccaagatctgtgctacactgacatcctcttcacagagcaagagaggggtgttggc
atcaagagtactcctgtgacagtagtcttgccagataccaaaggaaaatcctacctcttc
aatatcatggacactccaggacacgtgaatttttctgacgaggtcacagctggcttgcgc
atctcagatggagtggtccttttcatcgatgctgctgagggcgtgatgctgaacacagag
cggctgatcaagcacgccgtgcaggagaggctggcggtcaccgtgtgcatcaacaagatt
gaccggctgatcctagagctgaagctgccccccactgatgcttattacaagctgcgtcac
attgtagatgaggtcaacggactaataagcatgtattccactgacgagaacctaatcctt
tccccgctcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacactg
ggctcctttgccaagatctacgctgacacctttggtgacattaactaccaggaatttgct
aaaagactctggggtgacatctacttcaaccccaagacgcgaaagttcaccaaaaaggcc
ccaaccagcagctcccagaggagcttcgtggagtttatcttggagcccctctataagatc
ctcgctcaggttgtgggtgatgtggacaccagcctcccgaggaccctggatgagctcggc
atccacctgaccaaggaggagctgaagctgaacatccgccccctgctcaggctggtctgc
aaaaaattcttcggcgagttcacaggctttgtggacatgtgtgtgcagcatatcccctct
ccaaaggtgggcgccaagcccaagatcgagcacacctacaccggaggtgtggattccgac
ctcggggaggccatgagcgactgtgaccctgatggtcccctgatgtgccacactaccaag
atgtacagcacagacgatggggttcagtttcatgccttcggccgggtgctaagtggcacc
atccatgctgggcagcctgtgaaggtactgggagagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggccgcctttggatctccgtggccaggtaccacatcgaa
gtgaaccgtgttcctgctggcaactgggttctgattgaaggtgtcgatcaaccaattgtg
aagaccgcgaccataactgaaccccgaggcaatgaggaggctcagattttccggcccttg
aagttcaacaccacatctgttatcaagattgctgtggagccggtcaacccctctgagctg
cccaagatgctggacggcctccgcaaggtcaacaagagctatccgtccctcaccaccaag
gtggaagaatctggtgagcacgtgatcctgggtactggggagctctacctggactgtgtg
atgcacgatctgcggaagatgtactcggagatagacatcaaggtggctgaccccgttgtc
acgttttgtgagacggtcgtggaaacatcctccctcaagtgctttgctgaaactcccaat
aagaagaacaagatcaccatgattgccgagcctcttgagaaggggctcgctgaggacata
gagaacgaggtggtccagatcacgtggaacaggaagaagctgggagagttcttccagacc
aagtacgattgggatctgctggctgcccgttccatctgggcttttggccctgatgccacc
ggccccaacatcctggtggatgataccctgccctctgaggtggacaaggctcttctcggc
tcggtgaaggacagcatcgttcaaggtttccagtggggaaccagggaggggcccctctgt
gatgagttgattcgaaatgtcaagtttaagatcctggatgcagtcgttgcccaggagccc
ctgcaccggggtgggggccaaatcatccccacggccagaagagttgtctactctgccttc
ctcatggccacccctcgtctgatggagccctactacttcgtagaggtccaggcccccgca
gattgtgtttctgctgtttatactgtcctggccaggcgcagggggcacgtgactcaggat
gcacccatcccaggctcccctctctacaccatcaaagctttcatccccgccatcgactct
tttggctttgagaccgatctgcggactcacacgcaggggcaggccttttccttgtctgtc
ttccaccattggcagattgtacccggtgatcctctggacaagagcattgtcatccgtccc
ttggagccgcagccagcgccccacctggcccgagaattcatgatcaaaacccgtcgtagg
aagggcctgagtgaagacgtcagcatcagcaagttcttcgatgatcctatgttgctggag
ctcgccaagcaggatgttgtgctcaattaccccatgtga
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